RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 ACAA1P09110 424 aaPredicted RBP11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 FOLR3P41439 243 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 FGF8P55075 233 aaPredicted RBP11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 SHBQ15464 509 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 PRAMEF5Q5TYX0 476 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 PRAMEF6Q5VXH4 476 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 ADAD2Q8NCV1 583 aaKnown RBP11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 IGHV3-64DA0A0J9YX35 117 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 OR4C45A6NMZ5 311 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 METTL12A8MUP2 240 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 SLC25A6P12236 298 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 DUSP3P51452 185 aaPredicted RBP11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 KISS1Q15726 138 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 TMEM183BQ1AE95 376 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 FBXL14Q8N1E6 418 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 RBMXL3Q8N7X1 1067 aaKnown RBP11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 SLC24A4Q8NFF2 622 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 SLC25A43Q8WUT9 341 aaPredicted RBP11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 CALHM2Q9HA72 323 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 A0A0B4J293 547 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 OR5H15A6NDH6 313 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 OR5H1A6NKK0 313 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 ZNF814B7Z6K7 855 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 OPN1MWP04001 364 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 OR10J4P0C629 311 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 OPN1MW2P0DN77 364 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 OPN1MW3P0DN78 364 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 TBXA2RP21731 343 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 ADPRHP54922 357 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 RPS16P62249 146 aaKnown RBP11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 TMEM267Q0VDI3 215 aaPredicted RBP11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 CD200R1LQ6Q8B3 271 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 PPP1R3BQ86XI6 285 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 OSR2Q8N2R0 312 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 SLC35G3Q8N808 338 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 ST6GALNAC2Q9UJ37 374 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 KIAA0100Q14667 2235 aaKnown RBP11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 MAP1LC3B2A6NCE7 125 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 H3BQ15 152 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 ADAM20O43506 726 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 TRAF3IP2O43734 574 aaPredicted RBP11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 HEXAP06865 529 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 FGF2P09038 288 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 RCC1P18754 421 aaPredicted RBP11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 DTYMKP23919 212 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 UBE2V2Q15819 145 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 LHFPL2Q6ZUX7 228 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 NPEPL1Q8NDH3 523 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 RHOVQ96L33 236 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 FAAP24Q9BTP7 215 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 MAP1LC3BQ9GZQ8 125 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 ZNF275Q9NSD4 429 aaPredicted RBP11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 SF3B6Q9Y3B4 125 aaKnown RBP11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 DNAJC13O75165 2243 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 MPZL1O95297 269 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 OR3A4PP47883 348 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 PINX1Q96BK5 328 aaKnown RBP11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 LHX6Q9UPM6 363 aa11.08□□□□□ -0.64
CSPG4P13-202ENST00000567704 SOX15O60248 233 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 RECKO95980 971 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 CTLA4P16410 223 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 CSRP3P50461 194 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 POLR2GP62487 172 aaKnown RBP eCLIP11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 EDDM3AQ14507 147 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 RTL10Q7L3V2 364 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 PRSS41Q7RTY9 318 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 LRP11Q86VZ4 500 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 SLC26A10Q8NG04 563 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 NT5CQ8TCD5 201 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 ADGRG7Q96K78 797 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 SOX7Q9BT81 388 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 ALX4Q9H161 411 aaPredicted RBP11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 PARP11Q9NR21 331 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 FLRT3Q9NZU0 649 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 PISDQ9UG56 409 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 DLEC1Q9Y238 1755 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 SPINK4O60575 86 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 IL13RA2Q14627 380 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 ST8SIA1Q92185 356 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 ERGIC1Q969X5 290 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 NAA60Q9H7X0 242 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 NRXN2Q9P2S2 1712 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 TOX4O94842 621 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 EPPINO95925 133 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 GRPP07492 148 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 EN2P19622 333 aaPredicted RBP11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 TSPO2Q5TGU0 170 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 ZNF468Q5VIY5 522 aaPredicted RBP11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 ZNF547Q8IVP9 402 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 FAM181AQ8N9Y4 354 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 COL4A1P02462 1669 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 SEMA7AO75326 666 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 ZNF17P17021 662 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 H2BFSP57053 126 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 FOXK1P85037 733 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 SKP2Q13309 424 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 SMIM15Q7Z3B0 74 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 OR5AS1Q8N127 324 aa11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 LYRM2Q9NU23 88 aaPredicted RBP11.07□□□□□ -0.64
CSPG4P13-202ENST00000567704 VSIG4Q9Y279 399 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms