RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, human

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD4-215	ENST00000566843	GPR157	Q5UAW9	335 aa		13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	CRIP3	Q6Q6R5	217 aa		13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	MAFIP	Q8WZ33	124 aa		13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	DAZL	Q92904	295 aa	Known RBP	13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	PBDC1	Q9BVG4	233 aa		13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	TM2D1	Q9BX74	207 aa		13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	MRPL13	Q9BYD1	178 aa	Known RBP	13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	CHRD	Q9H2X0	955 aa		13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	SMDT1	Q9H4I9	107 aa		13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	SLC34A2	O95436	690 aa		13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	CAPZB	P47756	277 aa		13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	EFNA3	P52797	238 aa		13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	TLE3	Q04726	772 aa		13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	SULF2	Q8IWU5	870 aa		13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	LRRC18	Q8N456	261 aa		13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	ST8SIA1	Q92185	356 aa		13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	ZNF319	Q9P2F9	582 aa		13.78	□□□□□ -0.2
COMMD4-215	ENST00000566843	NDUFS6	O75380	124 aa	Known RBP	13.77	□□□□□ -0.21
COMMD4-215	ENST00000566843	MBP	P02686	304 aa	Predicted RBP	13.77	□□□□□ -0.21
COMMD4-215	ENST00000566843	CDX1	P47902	265 aa	Predicted RBP	13.77	□□□□□ -0.21
COMMD4-215	ENST00000566843	BID	P55957	195 aa		13.77	□□□□□ -0.21
COMMD4-215	ENST00000566843	SST	P61278	116 aa		13.77	□□□□□ -0.21
COMMD4-215	ENST00000566843	FZD2	Q14332	565 aa		13.77	□□□□□ -0.21
COMMD4-215	ENST00000566843	ARL6IP1	Q15041	203 aa		13.77	□□□□□ -0.21
COMMD4-215	ENST00000566843	RTL6	Q6ICC9	239 aa		13.77	□□□□□ -0.21
COMMD4-215	ENST00000566843	DOK3	Q7L591	496 aa		13.77	□□□□□ -0.21
COMMD4-215	ENST00000566843	TMEM156	Q8N614	296 aa		13.77	□□□□□ -0.21
COMMD4-215	ENST00000566843	LFNG	Q8NES3	379 aa		13.77	□□□□□ -0.21
COMMD4-215	ENST00000566843	SEMA6D	Q8NFY4	1073 aa		13.77	□□□□□ -0.21
COMMD4-215	ENST00000566843	GPER1	Q99527	375 aa		13.77	□□□□□ -0.21
COMMD4-215	ENST00000566843	IGKV1D-8	A0A087WSZ0	117 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	SPTY2D1-AS1	A0A0U1RR47	76 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	ANKUB1	A6NFN9	424 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	IFITM10	A6NMD0	228 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843		B4DGG1	531 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	CTSE	P14091	401 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	CHAT	P28329	748 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	BLVRB	P30043	206 aa	Predicted RBP	13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	ZNF121	P58317	390 aa	Predicted RBP	13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	THEM4	Q5T1C6	240 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	OR14K1	Q8NGZ2	314 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	SPSB2	Q99619	263 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	OPA3	Q9H6K4	179 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843		A0A1W2PNV4	684 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	C2CD4D	B7Z1M9	353 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	OR2C1	O95371	312 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	ATXN8OS	P0DMR3	200 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	ANOS1	P23352	680 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	APOBEC1	P41238	236 aa	Known RBP	13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	FHIT	P49789	147 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	C1QL2	Q7Z5L3	287 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	COMMD2	Q86X83	199 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	SNIP1	Q8TAD8	396 aa	Known RBP	13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	CD300LF	Q8TDQ1	290 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	SGK3	Q96BR1	496 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	MUCL1	Q96DR8	90 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	C5orf34	Q96MH7	638 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	S100A13	Q99584	98 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	ZNF2	Q9BSG1	426 aa	Predicted RBP	13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	EMC6	Q9BV81	110 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	CHRNA10	Q9GZZ6	450 aa		13.76	□□□□□ -0.21
COMMD4-215	ENST00000566843	RHPN2P1	A8MT19	583 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	OR1D4	P47884	311 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	KIAA0141	Q14154	515 aa	Predicted RBP	13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	PYY3	Q5JQD4	70 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	LCN10	Q6JVE6	187 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	CLEC9A	Q6UXN8	241 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	ZNF574	Q6ZN55	896 aa	Predicted RBP	13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	SLC16A14	Q7RTX9	510 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	OR1N1	Q8NGS0	311 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	OR2AJ1	Q8NGZ0	328 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	AKR7L	Q8NHP1	331 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	CDX2	Q99626	313 aa	Predicted RBP	13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	CHST5	Q9GZS9	411 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	UBE2Z	Q9H832	354 aa	Predicted RBP	13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	PNRC2	Q9NPJ4	139 aa	Known RBP	13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	GPR27	Q9NS67	375 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	FBXO7	Q9Y3I1	522 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	LIPT2	A6NK58	231 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843		K7N7A8	449 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	GIMD1	P0DJR0	217 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	NME1	P15531	152 aa	Known RBP	13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	GALNTL5	Q7Z4T8	443 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	MR1	Q95460	341 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	SERINC1	Q9NRX5	453 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	ALKBH4	Q9NXW9	302 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	B3GAT1	Q9P2W7	334 aa		13.75	□□□□□ -0.21
COMMD4-215	ENST00000566843	IGHV5-51	A0A0C4DH38	117 aa		13.74	□□□□□ -0.21
COMMD4-215	ENST00000566843		H7C1Q1	480 aa		13.74	□□□□□ -0.21
COMMD4-215	ENST00000566843	YIF1A	O95070	293 aa		13.74	□□□□□ -0.21
COMMD4-215	ENST00000566843	SCGB1D2	O95969	90 aa		13.74	□□□□□ -0.21
COMMD4-215	ENST00000566843	IGHV4-34	P06331	123 aa		13.74	□□□□□ -0.21
COMMD4-215	ENST00000566843	OR13C7	P0DN81	318 aa		13.74	□□□□□ -0.21
COMMD4-215	ENST00000566843	SLC2A1	P11166	492 aa		13.74	□□□□□ -0.21
COMMD4-215	ENST00000566843	ZNF43	P17038	809 aa		13.74	□□□□□ -0.21
COMMD4-215	ENST00000566843	GPX4	P36969	197 aa	Predicted RBP	13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms