RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 CHST5Q9GZS9 411 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 PURGQ9UJV8 347 aaKnown RBP14.69□□□□□ -0.06
CMTM3-213ENST00000566756 TCFL5Q9UL49 500 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 C9orf172C9J069 976 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 TAAR5O14804 337 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 RAMP1O60894 148 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 RPS2P15880 293 aaKnown RBP14.69□□□□□ -0.06
CMTM3-213ENST00000566756 CPT2P23786 658 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 IL32P24001 234 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 CLDN17P56750 224 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 TMEM164Q5U3C3 297 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 IL34Q6ZMJ4 242 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 RRNAD1Q96FB5 475 aaKnown RBP14.69□□□□□ -0.06
CMTM3-213ENST00000566756 LYZL4Q96KX0 146 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 PECRQ9BY49 303 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 ZNF160Q9HCG1 818 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 ASF1BQ9NVP2 202 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 MEMO1Q9Y316 297 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 A0A1W2PNU3 283 aaPredicted RBP14.68□□□□□ -0.06
CMTM3-213ENST00000566756 A0A1W2PP11 408 aa14.68□□□□□ -0.06
CMTM3-213ENST00000566756 DHRS7CA6NNS2 312 aa14.68□□□□□ -0.06
CMTM3-213ENST00000566756 MTRF1O75570 445 aaKnown RBP14.68□□□□□ -0.06
CMTM3-213ENST00000566756 TCN2P20062 427 aa14.68□□□□□ -0.06
CMTM3-213ENST00000566756 SFTPDP35247 375 aa14.68□□□□□ -0.06
CMTM3-213ENST00000566756 SNU13P55769 128 aaKnown RBP14.68□□□□□ -0.06
CMTM3-213ENST00000566756 ENDOGQ14249 297 aaKnown RBP14.68□□□□□ -0.06
CMTM3-213ENST00000566756 SSPNQ14714 243 aa14.68□□□□□ -0.06
CMTM3-213ENST00000566756 POC1AQ8NBT0 407 aa14.68□□□□□ -0.06
CMTM3-213ENST00000566756 CT55Q8WUE5 264 aa14.68□□□□□ -0.06
CMTM3-213ENST00000566756 HAS2Q92819 552 aa14.68□□□□□ -0.06
CMTM3-213ENST00000566756 NTNG2Q96CW9 530 aa14.68□□□□□ -0.06
CMTM3-213ENST00000566756 SAT2Q96F10 170 aaPredicted RBP14.68□□□□□ -0.06
CMTM3-213ENST00000566756 PARD6AQ9NPB6 346 aa14.68□□□□□ -0.06
CMTM3-213ENST00000566756 MMP26Q9NRE1 261 aa14.68□□□□□ -0.06
CMTM3-213ENST00000566756 PCDHB16Q9NRJ7 776 aa14.68□□□□□ -0.06
CMTM3-213ENST00000566756 CARHSP1Q9Y2V2 147 aaKnown RBP14.68□□□□□ -0.06
CMTM3-213ENST00000566756 NSG1A0A0A6YYJ2 146 aa14.67□□□□□ -0.06
CMTM3-213ENST00000566756 PMS2P1A4D2B8 440 aa14.67□□□□□ -0.06
CMTM3-213ENST00000566756 SUCLG1P53597 346 aaKnown RBP14.67□□□□□ -0.06
CMTM3-213ENST00000566756 CSNK2A1P68400 391 aaPredicted RBP14.67□□□□□ -0.06
CMTM3-213ENST00000566756 TRIP6Q15654 476 aaKnown RBP14.67□□□□□ -0.06
CMTM3-213ENST00000566756 ANKRD55Q3KP44 614 aa14.67□□□□□ -0.06
CMTM3-213ENST00000566756 NKAPLQ5M9Q1 402 aa14.67□□□□□ -0.06
CMTM3-213ENST00000566756 OPN5Q6U736 354 aa14.67□□□□□ -0.06
CMTM3-213ENST00000566756 CSNK2A3Q8NEV1 391 aa14.67□□□□□ -0.06
CMTM3-213ENST00000566756 OPN1LWP04000 364 aa14.67□□□□□ -0.06
CMTM3-213ENST00000566756 CSTBP04080 98 aaKnown RBP14.67□□□□□ -0.06
CMTM3-213ENST00000566756 FAM157CP0CG43 387 aa14.67□□□□□ -0.06
CMTM3-213ENST00000566756 ICAM2P13598 275 aa14.67□□□□□ -0.06
CMTM3-213ENST00000566756 ANOS1P23352 680 aa14.67□□□□□ -0.06
CMTM3-213ENST00000566756 BLVRBP30043 206 aaPredicted RBP14.67□□□□□ -0.06
CMTM3-213ENST00000566756 FLI1Q01543 452 aaPredicted RBP14.67□□□□□ -0.06
CMTM3-213ENST00000566756 SLC9A3R2Q15599 337 aa14.67□□□□□ -0.06
CMTM3-213ENST00000566756 EIF5AL1Q6IS14 154 aaKnown RBP14.67□□□□□ -0.06
CMTM3-213ENST00000566756 DHRS13Q6UX07 377 aa14.67□□□□□ -0.06
CMTM3-213ENST00000566756 ESX1Q8N693 406 aa14.67□□□□□ -0.06
CMTM3-213ENST00000566756 NABP1Q96AH0 204 aa14.67□□□□□ -0.06
CMTM3-213ENST00000566756 NARS2Q96I59 477 aaKnown RBP14.67□□□□□ -0.06
CMTM3-213ENST00000566756 NAA11Q9BSU3 229 aaPredicted RBP14.67□□□□□ -0.06
CMTM3-213ENST00000566756 DECR2Q9NUI1 292 aa14.67□□□□□ -0.06
CMTM3-213ENST00000566756 EHFQ9NZC4 300 aa14.67□□□□□ -0.06
CMTM3-213ENST00000566756 E9PLN8 166 aa14.66□□□□□ -0.06
CMTM3-213ENST00000566756 NUPL2O15504 423 aaKnown RBP14.66□□□□□ -0.06
CMTM3-213ENST00000566756 ADAP1O75689 374 aa14.66□□□□□ -0.06
CMTM3-213ENST00000566756 HPNP05981 417 aa14.66□□□□□ -0.06
CMTM3-213ENST00000566756 TCF15Q12870 199 aa14.66□□□□□ -0.06
CMTM3-213ENST00000566756 HES3Q5TGS1 186 aa14.66□□□□□ -0.06
CMTM3-213ENST00000566756 PPP1R32Q7Z5V6 425 aa14.66□□□□□ -0.06
CMTM3-213ENST00000566756 TMEM123Q8N131 208 aa14.66□□□□□ -0.06
CMTM3-213ENST00000566756 CPNE2Q96FN4 548 aaPredicted RBP14.66□□□□□ -0.06
CMTM3-213ENST00000566756 S100A13Q99584 98 aa14.66□□□□□ -0.06
CMTM3-213ENST00000566756 TSNAXQ99598 290 aaKnown RBP14.66□□□□□ -0.06
CMTM3-213ENST00000566756 PRRX2Q99811 253 aa14.66□□□□□ -0.06
CMTM3-213ENST00000566756 ST6GALNAC5Q9BVH7 336 aa14.66□□□□□ -0.06
CMTM3-213ENST00000566756 ANGPTL4Q9BY76 406 aa14.66□□□□□ -0.06
CMTM3-213ENST00000566756 SLC5A7Q9GZV3 580 aa14.66□□□□□ -0.06
CMTM3-213ENST00000566756 METTL8Q9H825 291 aaKnown RBP14.66□□□□□ -0.06
CMTM3-213ENST00000566756 ZNF629Q9UEG4 869 aaPredicted RBP14.66□□□□□ -0.06
CMTM3-213ENST00000566756 EDARQ9UNE0 448 aa14.66□□□□□ -0.06
CMTM3-213ENST00000566756 C14orf166Q9Y224 244 aaKnown RBP14.66□□□□□ -0.06
CMTM3-213ENST00000566756 EML6Q6ZMW3 1958 aa14.66□□□□□ -0.06
CMTM3-213ENST00000566756 STMND1H3BQB6 276 aa14.65□□□□□ -0.06
CMTM3-213ENST00000566756 UBE2V2Q15819 145 aa14.65□□□□□ -0.06
CMTM3-213ENST00000566756 CHRFAM7AQ494W8 412 aa14.65□□□□□ -0.06
CMTM3-213ENST00000566756 ADAMTS17Q8TE56 1095 aa14.65□□□□□ -0.06
CMTM3-213ENST00000566756 C1orf123Q9NWV4 160 aa14.65□□□□□ -0.06
CMTM3-213ENST00000566756 LPAR3Q9UBY5 353 aa14.65□□□□□ -0.06
CMTM3-213ENST00000566756 NDRG3Q9UGV2 375 aa14.65□□□□□ -0.06
CMTM3-213ENST00000566756 FAM74A7A6NL05 159 aa14.65□□□□□ -0.06
CMTM3-213ENST00000566756 DHHO43323 396 aa14.65□□□□□ -0.06
CMTM3-213ENST00000566756 CELA2AP08217 269 aa14.65□□□□□ -0.06
CMTM3-213ENST00000566756 DSCR4P56555 118 aaPredicted RBP14.65□□□□□ -0.06
CMTM3-213ENST00000566756 FAM74A3Q4VXF1 159 aa14.65□□□□□ -0.06
CMTM3-213ENST00000566756 ZNF585AQ6P3V2 769 aa14.65□□□□□ -0.06
CMTM3-213ENST00000566756 C1QL2Q7Z5L3 287 aa14.65□□□□□ -0.06
CMTM3-213ENST00000566756 PAQR8Q8TEZ7 354 aa14.65□□□□□ -0.06
CMTM3-213ENST00000566756 SPTSSAQ969W0 71 aa14.65□□□□□ -0.06
CMTM3-213ENST00000566756 OR10C1Q96KK4 312 aa14.65□□□□□ -0.06
CMTM3-213ENST00000566756 GPR87Q9BY21 358 aa14.65□□□□□ -0.06
CMTM3-213ENST00000566756 OR5AC2Q9NZP5 309 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms