RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 ZNF230Q9UIE0 474 aaPredicted RBP12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 TGOLN2O43493 480 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 TRA2AQ13595 282 aaKnown RBP eCLIP12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 OXA1LQ15070 435 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 ACER2Q5QJU3 275 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 OR13G1Q8NGZ3 307 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 ERRFI1Q9UJM3 462 aaPredicted RBP12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 ECM29Q5VYK3 1845 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 TRAV1-2A0A0B4J238 106 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 HSBP1O75506 76 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 LYZL6O75951 148 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 RD3LP0DJH9 198 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 EPHA2P29317 976 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 IL11RAQ14626 422 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 ZNF774Q6NX45 483 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 WDR31Q8NA23 367 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 PPIL1Q9Y3C6 166 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 A0A1B0GTL3 188 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 J3QR89 54 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 RER1O15258 196 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 SLC25A5P05141 298 aaKnown RBP12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 TNFAIP6P98066 277 aaPredicted RBP12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 TOMM34Q15785 309 aaPredicted RBP12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 LINC00299Q6ZSB3 139 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 RHNO1Q9BSD3 238 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 ZNF768Q9H5H4 540 aaKnown RBP12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 IGHV3-43A0A0B4J1X8 118 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 IGHV3-43DP0DP04 118 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 FUT7Q11130 342 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 MRGPREQ86SM8 312 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 HSD17B10Q99714 261 aaKnown RBP12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 LOXHD1Q8IVV2 1947 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 PAPPAQ13219 1627 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 IGHV5-51A0A0C4DH38 117 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 A0A1W2PRD5 423 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 A0A1W2PRF3 423 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 A0A1W2PRM7 423 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 AKR7A2O43488 359 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 BCL2L11O43521 198 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 LPAR6P43657 344 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 FZD5Q13467 585 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 ZNF260Q3ZCT1 412 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 SPNS3Q6ZMD2 512 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 ANKRD37Q7Z713 158 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 CADM4Q8NFZ8 388 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 LRRC29Q8WV35 223 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 GAL3ST2Q9H3Q3 398 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 PRDM7Q9NQW5 492 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 CCL2P13500 99 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 PMCHP20382 165 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 G0S2P27469 103 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 SSBP1Q04837 148 aaKnown RBP12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 GAMTQ14353 236 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 Q3ZCU0 254 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 TMEM108Q6UXF1 575 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 NOL4LQ96MY1 436 aaPredicted RBP12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 TMPRSS13Q9BYE2 586 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 MMP25Q9NPA2 562 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 UQCC1Q9NVA1 299 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 OR2M5A3KFT3 312 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 FABP4P15090 132 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 FFAR4Q5NUL3 377 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 BLNKQ8WV28 456 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 YIPF6Q96EC8 236 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 CXorf58Q96LI9 332 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 C3orf80F5H4A9 247 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 PYCARD-AS1I3L0S3 204 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 GYPAP02724 150 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 KISS1Q15726 138 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 PABPC1L2AQ5JQF8 200 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 TMEM88Q6PEY1 159 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 TMEM65Q6PI78 240 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 MED30Q96HR3 178 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 MTCH2Q9Y6C9 303 aa12.16□□□□□ -0.46
CX3CL1-204ENST00000565912 ALX3O95076 343 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 EPPINO95925 133 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 OPN1MWP04001 364 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 OPN1MW2P0DN77 364 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 OPN1MW3P0DN78 364 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 SLC37A1P57057 533 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 TGIF2LXQ8IUE1 241 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 SMIM4Q8WVI0 70 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 ARHGAP5-AS1Q96IT6 56 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 PLA2G2FQ9BZM2 168 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 DCAF16Q9NXF7 216 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 FAM157AC9JC47 383 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 ZNF32P17041 273 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 RAB5AP20339 215 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 PPP1CBP62140 327 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 SPINK9Q5DT21 86 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 TP53I13Q8NBR0 393 aaPredicted RBP12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 SMOC1Q9H4F8 434 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 IL36GQ9NZH8 169 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 SERGEFQ9UGK8 458 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 MYO5AQ9Y4I1 1855 aaKnown RBP12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 SPINK4O60575 86 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 PJVKQ0ZLH3 352 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 ARRDC1Q8N5I2 433 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 OR10D3Q8NH80 312 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 DOK1Q99704 481 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms