RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 CLIC3O95833 236 aa12.84□□□□□ -0.35
COMMD4-212ENST00000565517 RPSAP08865 295 aaKnown RBP12.84□□□□□ -0.35
COMMD4-212ENST00000565517 HTR1AP08908 422 aa12.84□□□□□ -0.35
COMMD4-212ENST00000565517 PPIAL4GP0DN37 164 aa12.84□□□□□ -0.35
COMMD4-212ENST00000565517 ZNF19P17023 458 aa12.84□□□□□ -0.35
COMMD4-212ENST00000565517 DCKP27707 260 aa12.84□□□□□ -0.35
COMMD4-212ENST00000565517 CD276Q5ZPR3 534 aa12.84□□□□□ -0.35
COMMD4-212ENST00000565517 BTNL3Q6UXE8 466 aa12.84□□□□□ -0.35
COMMD4-212ENST00000565517 ZNF573Q86YE8 665 aa12.84□□□□□ -0.35
COMMD4-212ENST00000565517 HAVCR2Q8TDQ0 301 aa12.84□□□□□ -0.35
COMMD4-212ENST00000565517 AQP3Q92482 292 aa12.84□□□□□ -0.35
COMMD4-212ENST00000565517 TECTBQ96PL2 329 aa12.84□□□□□ -0.35
COMMD4-212ENST00000565517 MRI1Q9BV20 369 aa12.84□□□□□ -0.35
COMMD4-212ENST00000565517 VCXQ9H320 206 aa12.84□□□□□ -0.35
COMMD4-212ENST00000565517 PLEKHA1Q9HB21 404 aa12.84□□□□□ -0.35
COMMD4-212ENST00000565517 GPR173Q9NS66 373 aa12.84□□□□□ -0.35
COMMD4-212ENST00000565517 CTSZQ9UBR2 303 aa12.84□□□□□ -0.35
COMMD4-212ENST00000565517 AUP1Q9Y679 476 aa12.84□□□□□ -0.35
COMMD4-212ENST00000565517 IGHV3OR15-7A0A075B7D8 119 aa12.83□□□□□ -0.36
COMMD4-212ENST00000565517 LOC107986453A0A1B0GWG9 222 aa12.83□□□□□ -0.36
COMMD4-212ENST00000565517 PQLC2LA1A4F0 135 aa12.83□□□□□ -0.36
COMMD4-212ENST00000565517 ANKRD61A6NGH8 418 aa12.83□□□□□ -0.36
COMMD4-212ENST00000565517 TMPRSS2O15393 492 aa12.83□□□□□ -0.36
COMMD4-212ENST00000565517 GATBO75879 557 aaKnown RBP12.83□□□□□ -0.36
COMMD4-212ENST00000565517 FSHBP01225 129 aa12.83□□□□□ -0.36
COMMD4-212ENST00000565517 CAPGP40121 348 aa12.83□□□□□ -0.36
COMMD4-212ENST00000565517 NANOS3P60323 173 aaKnown RBP12.83□□□□□ -0.36
COMMD4-212ENST00000565517 SLC34A1Q06495 639 aa12.83□□□□□ -0.36
COMMD4-212ENST00000565517 ALKBH1Q13686 389 aaKnown RBP12.83□□□□□ -0.36
COMMD4-212ENST00000565517 SMN1Q16637 294 aaKnown RBP12.83□□□□□ -0.36
COMMD4-212ENST00000565517 SLC36A1Q7Z2H8 476 aa12.83□□□□□ -0.36
COMMD4-212ENST00000565517 RDH10Q8IZV5 341 aa12.83□□□□□ -0.36
COMMD4-212ENST00000565517 PP6455Q8WZ26 134 aa12.83□□□□□ -0.36
COMMD4-212ENST00000565517 CHST5Q9GZS9 411 aa12.83□□□□□ -0.36
COMMD4-212ENST00000565517 RASL12Q9NYN1 266 aa12.83□□□□□ -0.36
COMMD4-212ENST00000565517 DNAJB11Q9UBS4 358 aa12.83□□□□□ -0.36
COMMD4-212ENST00000565517 A6NIN4 97 aa12.82□□□□□ -0.36
COMMD4-212ENST00000565517 AKR7A2O43488 359 aa12.82□□□□□ -0.36
COMMD4-212ENST00000565517 ENSAO43768 121 aaKnown RBP12.82□□□□□ -0.36
COMMD4-212ENST00000565517 NOS1APO75052 506 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-212ENST00000565517 RHBDL1O75783 438 aa12.82□□□□□ -0.36
COMMD4-212ENST00000565517 ECDO95905 644 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-212ENST00000565517 SERPINA3P01011 423 aa12.82□□□□□ -0.36
COMMD4-212ENST00000565517 LIPFP07098 398 aa12.82□□□□□ -0.36
COMMD4-212ENST00000565517 ACAA1P09110 424 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-212ENST00000565517 LIMS3P0CW19 117 aa12.82□□□□□ -0.36
COMMD4-212ENST00000565517 LIMS4P0CW20 117 aa12.82□□□□□ -0.36
COMMD4-212ENST00000565517 GLRA1P23415 457 aa12.82□□□□□ -0.36
COMMD4-212ENST00000565517 DMRTC1Q5HYR2 192 aa12.82□□□□□ -0.36
COMMD4-212ENST00000565517 STUMQ69YW2 141 aa12.82□□□□□ -0.36
COMMD4-212ENST00000565517 HAGHLQ6PII5 290 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-212ENST00000565517 CNIH3Q8TBE1 160 aa12.82□□□□□ -0.36
COMMD4-212ENST00000565517 SEH1LQ96EE3 360 aa12.82□□□□□ -0.36
COMMD4-212ENST00000565517 NUDT16L1Q9BRJ7 211 aaKnown RBP12.82□□□□□ -0.36
COMMD4-212ENST00000565517 WDR13Q9H1Z4 485 aa12.82□□□□□ -0.36
COMMD4-212ENST00000565517 ISG20L2Q9H9L3 353 aaKnown RBP12.82□□□□□ -0.36
COMMD4-212ENST00000565517 SMURF1Q9HCE7 757 aa12.82□□□□□ -0.36
COMMD4-212ENST00000565517 NKX1-2Q9UD57 310 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-212ENST00000565517 SLC7A11Q9UPY5 501 aa12.82□□□□□ -0.36
COMMD4-212ENST00000565517 POLDIP2Q9Y2S7 368 aa12.82□□□□□ -0.36
COMMD4-212ENST00000565517 ATRQ13535 2644 aa12.82□□□□□ -0.36
COMMD4-212ENST00000565517 A0A0A6YYJ9 748 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 OR4C45A6NMZ5 311 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 J3QT63 122 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 DVL1O14640 695 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 GPR37O15354 613 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 ADRA2CP18825 462 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 EPHA1P21709 976 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 MPZP25189 248 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 HAAOP46952 286 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 TGM4P49221 684 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 FUT6P51993 359 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 GBX2P52951 348 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-212ENST00000565517 UBE2V2Q15819 145 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 ZNF788Q6ZQV5 615 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 UTS2BQ765I0 119 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 C8orf59Q8N0T1 100 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-212ENST00000565517 POC1AQ8NBT0 407 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 ANGPTL6Q8NI99 470 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 TMIGD2Q96BF3 282 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 MED30Q96HR3 178 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 DMRTB1Q96MA1 342 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 CCL13Q99616 98 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 PKIBQ9C010 78 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 NLKQ9UBE8 527 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 HHLA2Q9UM44 414 aa12.81□□□□□ -0.36
COMMD4-212ENST00000565517 CAB39Q9Y376 341 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-212ENST00000565517 FBN1P35555 2871 aaKnown RBP12.8□□□□□ -0.36
COMMD4-212ENST00000565517 ERICH4A6NGS2 130 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 TMEM212A6NML5 194 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 C22orf46C9J442 243 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 H0YJX3 145 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 H3BSH0 61 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 TCF21O43680 179 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 FCN3O75636 299 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 PGA5P0DJD9 388 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 AMY2BP19961 511 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 ARMCX4Q5H9R4 360 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 USP43Q70EL4 1123 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 ZNF676Q8N7Q3 588 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms