RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 PQLC2LA1A4F0 135 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 PRSS44E7EML9 344 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 AKR7A2O43488 359 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 CYB5AP00167 134 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 CELA3BP08861 270 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 ZNF35P13682 527 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 GTF2F2P13984 249 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 MGMTP16455 207 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 SRP9P49458 86 aaKnown RBP13.39□□□□□ -0.27
COMMD4-210ENST00000564587 VEGFCP49767 419 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 BTG1P62324 171 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 PDZK1IP1Q13113 114 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 HLXQ14774 488 aaPredicted RBP13.39□□□□□ -0.27
COMMD4-210ENST00000564587 PPA1Q15181 289 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 TSC22D1Q15714 1073 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 CDNFQ49AH0 187 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 PLA1AQ53H76 456 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 RPRMLQ8N4K4 120 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 OR51T1Q8NGJ9 327 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 CHAC2Q8WUX2 184 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 SEH1LQ96EE3 360 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 MARVELD1Q9BSK0 173 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 ELL3Q9HB65 397 aaPredicted RBP13.39□□□□□ -0.27
COMMD4-210ENST00000564587 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.39□□□□□ -0.27
COMMD4-210ENST00000564587 NLKQ9UBE8 527 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 KLK11Q9UBX7 282 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 SPEF1Q9Y4P9 236 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 ASH1LQ9NR48 2969 aaKnown RBP13.39□□□□□ -0.27
COMMD4-210ENST00000564587 A0A0G2JNJ9 132 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 A0A1W2PR80 420 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 H3BUI4 141 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 SSX4O60224 188 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 CA11O75493 328 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 RCVRNP35243 200 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 CBX5P45973 191 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 RAG2P55895 527 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 TAS2R19P59542 299 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 RSBN1Q5VWQ0 802 aaPredicted RBP13.38□□□□□ -0.27
COMMD4-210ENST00000564587 C3P1Q6ZMU1 363 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 Q6ZTK2 550 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 RNF144BQ7Z419 303 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 TMEM200AQ86VY9 491 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 TMEM229BQ8NBD8 167 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 ST6GALNAC3Q8NDV1 305 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 TMEM104Q8NE00 496 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 OR5D18Q8NGL1 313 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 OR1J1Q8NGS3 322 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 RAB3CQ96E17 227 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 CACNG6Q9BXT2 260 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 HRASLSQ9HDD0 168 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 Q9UFV3 132 aa13.38□□□□□ -0.27
COMMD4-210ENST00000564587 ZGRF1Q86YA3 2104 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 IGKV1-27A0A075B6S5 117 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 MEIOCA2RUB1 952 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 IQCF6A8MYZ5 107 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 TPD52L2O43399 206 aaKnown RBP13.37□□□□□ -0.27
COMMD4-210ENST00000564587 AGFG2O95081 481 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 DHFRP00374 187 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 CECR9P0C854 216 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 AKAIN1P0CW23 69 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 HIST1H1DP16402 221 aaKnown RBP13.37□□□□□ -0.27
COMMD4-210ENST00000564587 SERPINA2P20848 420 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 GNG3P63215 75 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 PCGF3Q3KNV8 242 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 MOGAT2Q3SYC2 334 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 C1QL2Q7Z5L3 287 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 ZNF573Q86YE8 665 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 MKXQ8IYA7 352 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 CADM3Q8N126 398 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 CELF2-AS1Q8N7Q2 184 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 SLC25A40Q8TBP6 338 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 RND1Q92730 232 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 CMBLQ96DG6 245 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 GAL3ST1Q99999 423 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 MICU1Q9BPX6 476 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 SELENOIQ9C0D9 397 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 MMP28Q9H239 520 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 POFUT1Q9H488 388 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 BANF2Q9H503 90 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 RHOFQ9HBH0 211 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 GPR160Q9UJ42 338 aa13.37□□□□□ -0.27
COMMD4-210ENST00000564587 ITPR1Q14643 2758 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 SERPINE3A8MV23 424 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 EEF1E1-BLOC1S5C9J1V9 151 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 INMT-MINDY4F8WBC2 141 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 HTR3BO95264 441 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 TBPP20226 339 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 BMP5P22003 454 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 GNG2P59768 71 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 ZNF718Q3SXZ3 478 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 PRR30Q53SZ7 412 aaPredicted RBP13.36□□□□□ -0.27
COMMD4-210ENST00000564587 AGAP6Q5VW22 663 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 OR2T2Q6IF00 324 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 MTFR2Q6P444 385 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 BTN2A1Q7KYR7 527 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 ZNF554Q86TJ5 538 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 MYPOPQ86VE0 399 aaPredicted RBP13.36□□□□□ -0.27
COMMD4-210ENST00000564587 Q8NFD4 153 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 OR51F2Q8NH61 342 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 OR5P3Q8WZ94 311 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms