RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 FAM183AA6NL82 134 aa15.12■□□□□ 0.01
NME3-204ENST00000563498 MTRF1O75570 445 aaKnown RBP15.12■□□□□ 0.01
NME3-204ENST00000563498 PAX6P26367 422 aa15.12■□□□□ 0.01
NME3-204ENST00000563498 BMXP51813 675 aa15.12■□□□□ 0.01
NME3-204ENST00000563498 LGALS4P56470 323 aa15.12■□□□□ 0.01
NME3-204ENST00000563498 PSMA6P60900 246 aaKnown RBP15.12■□□□□ 0.01
NME3-204ENST00000563498 RPL31P62899 125 aaKnown RBP15.12■□□□□ 0.01
NME3-204ENST00000563498 LYG1Q8N1E2 194 aa15.12■□□□□ 0.01
NME3-204ENST00000563498 OR8B12Q8NGG6 310 aa15.12■□□□□ 0.01
NME3-204ENST00000563498 WIPF2Q8TF74 440 aaPredicted RBP15.12■□□□□ 0.01
NME3-204ENST00000563498 MMP28Q9H239 520 aa15.12■□□□□ 0.01
NME3-204ENST00000563498 YY1AP1Q9H869 796 aa15.12■□□□□ 0.01
NME3-204ENST00000563498 MED20Q9H944 212 aa15.12■□□□□ 0.01
NME3-204ENST00000563498 FAM90A8PA6NJQ4 464 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 OR5B21A6NL26 309 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 ZNF732B4DXR9 585 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 CD28P10747 220 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 MAP2K3P46734 347 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 CAPZA1P52907 286 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 MICAQ29983 383 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 TMEM200BQ69YZ2 307 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 CD300LDQ6UXZ3 194 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 ZNF561Q8N587 486 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 OR5A2Q8NGI9 324 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 FAM81AQ8TBF8 368 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 AQP3Q92482 292 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 PHF21AQ96BD5 680 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 R3HDM4Q96D70 268 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 NKX3-1Q99801 234 aaPredicted RBP15.11■□□□□ 0.01
NME3-204ENST00000563498 USE1Q9NZ43 259 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 TCF19Q9Y242 345 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 NBEAL2Q6ZNJ1 2754 aa15.11■□□□□ 0.01
NME3-204ENST00000563498 ADARB2-AS1A8MUL3 147 aa15.1■□□□□ 0.01
NME3-204ENST00000563498 ERVFRD-1P60508 538 aa15.1■□□□□ 0.01
NME3-204ENST00000563498 SMIM21Q3B7S5 101 aa15.1■□□□□ 0.01
NME3-204ENST00000563498 ACP7Q6ZNF0 438 aa15.1■□□□□ 0.01
NME3-204ENST00000563498 CALHM1Q8IU99 346 aa15.1■□□□□ 0.01
NME3-204ENST00000563498 TEX47Q8TBZ9 253 aa15.1■□□□□ 0.01
NME3-204ENST00000563498 THEM6Q8WUY1 208 aa15.1■□□□□ 0.01
NME3-204ENST00000563498 OTULINQ96BN8 352 aa15.1■□□□□ 0.01
NME3-204ENST00000563498 ELAC2Q9BQ52 826 aaKnown RBP15.1■□□□□ 0.01
NME3-204ENST00000563498 A0A0U1RQV5 110 aa15.09■□□□□ 0.01
NME3-204ENST00000563498 ACOD1A6NK06 481 aa15.09■□□□□ 0.01
NME3-204ENST00000563498 RFPL4AA6NLU0 287 aa15.09■□□□□ 0.01
NME3-204ENST00000563498 RFPL4AL1F8VTS6 287 aa15.09■□□□□ 0.01
NME3-204ENST00000563498 SLC1A7O00341 560 aa15.09■□□□□ 0.01
NME3-204ENST00000563498 ATP6V1B1P15313 513 aa15.09■□□□□ 0.01
NME3-204ENST00000563498 FAHP16930 419 aa15.09■□□□□ 0.01
NME3-204ENST00000563498 COX7A1P24310 79 aa15.09■□□□□ 0.01
NME3-204ENST00000563498 PPP1R8Q12972 351 aaKnown RBP15.09■□□□□ 0.01
NME3-204ENST00000563498 HABP2Q14520 560 aaPredicted RBP15.09■□□□□ 0.01
NME3-204ENST00000563498 CNN3Q15417 329 aaKnown RBP15.09■□□□□ 0.01
NME3-204ENST00000563498 CEP78Q5JTW2 689 aa15.09■□□□□ 0.01
NME3-204ENST00000563498 HAGHLQ6PII5 290 aaPredicted RBP15.09■□□□□ 0.01
NME3-204ENST00000563498 CD177Q8N6Q3 437 aa15.09■□□□□ 0.01
NME3-204ENST00000563498 POC1AQ8NBT0 407 aa15.09■□□□□ 0.01
NME3-204ENST00000563498 FOXRED1Q96CU9 486 aaPredicted RBP15.09■□□□□ 0.01
NME3-204ENST00000563498 CITED2Q99967 270 aaPredicted RBP15.09■□□□□ 0.01
NME3-204ENST00000563498 WNT10AQ9GZT5 417 aa15.09■□□□□ 0.01
NME3-204ENST00000563498 OR51V1Q9H2C8 321 aa15.09■□□□□ 0.01
NME3-204ENST00000563498 MAGIXQ9H6Y5 334 aa15.09■□□□□ 0.01
NME3-204ENST00000563498 REEP1Q9H902 201 aa15.09■□□□□ 0.01
NME3-204ENST00000563498 ACTR3BQ9P1U1 418 aa15.09■□□□□ 0.01
NME3-204ENST00000563498 SAMHD1Q9Y3Z3 626 aaKnown RBP15.09■□□□□ 0.01
NME3-204ENST00000563498 SELENOFO60613 162 aa15.08■□□□□ 0
NME3-204ENST00000563498 PRDX2P32119 198 aa15.08■□□□□ 0
NME3-204ENST00000563498 ZBTB37Q5TC79 503 aa15.08■□□□□ 0
NME3-204ENST00000563498 OR2T5Q6IEZ7 315 aa15.08■□□□□ 0
NME3-204ENST00000563498 CCBE1Q6UXH8 406 aaPredicted RBP15.08■□□□□ 0
NME3-204ENST00000563498 CYP2R1Q6VVX0 501 aa15.08■□□□□ 0
NME3-204ENST00000563498 LHFPL4Q7Z7J7 247 aa15.08■□□□□ 0
NME3-204ENST00000563498 WFDC9Q8NEX5 89 aa15.08■□□□□ 0
NME3-204ENST00000563498 OR2T29Q8NH02 315 aa15.08■□□□□ 0
NME3-204ENST00000563498 PRSS22Q9GZN4 317 aa15.08■□□□□ 0
NME3-204ENST00000563498 NDE1Q9NXR1 346 aa15.08■□□□□ 0
NME3-204ENST00000563498 VNN3Q9NY84 501 aa15.08■□□□□ 0
NME3-204ENST00000563498 PITPNC1Q9UKF7 332 aa15.08■□□□□ 0
NME3-204ENST00000563498 TBL2Q9Y4P3 447 aaKnown RBP15.08■□□□□ 0
NME3-204ENST00000563498 U3KQV3 271 aa15.08■□□□□ 0
NME3-204ENST00000563498 KMT2CQ8NEZ4 4911 aaKnown RBP15.07■□□□□ 0
NME3-204ENST00000563498 DNAH3Q8TD57 4116 aa15.07■□□□□ 0
NME3-204ENST00000563498 A6NDX4 124 aa15.07■□□□□ 0
NME3-204ENST00000563498 PRODHO43272 600 aa15.07■□□□□ 0
NME3-204ENST00000563498 CCL3L1P16619 93 aa15.07■□□□□ 0
NME3-204ENST00000563498 ATP6V1B2P21281 511 aa15.07■□□□□ 0
NME3-204ENST00000563498 GK3PQ14409 553 aa15.07■□□□□ 0
NME3-204ENST00000563498 HSP90B2PQ58FF3 399 aa15.07■□□□□ 0
NME3-204ENST00000563498 FOXB2Q5VYV0 432 aa15.07■□□□□ 0
NME3-204ENST00000563498 C16orf89Q6UX73 402 aa15.07■□□□□ 0
NME3-204ENST00000563498 TRPM8Q7Z2W7 1104 aa15.07■□□□□ 0
NME3-204ENST00000563498 DYNAPQ8N1N2 210 aa15.07■□□□□ 0
NME3-204ENST00000563498 IQCF1Q8N6M8 205 aa15.07■□□□□ 0
NME3-204ENST00000563498 OR2T27Q8NH04 317 aa15.07■□□□□ 0
NME3-204ENST00000563498 RPS4Y2Q8TD47 263 aa15.07■□□□□ 0
NME3-204ENST00000563498 MALSU1Q96EH3 234 aa15.07■□□□□ 0
NME3-204ENST00000563498 NIPSNAP1Q9BPW8 284 aa15.07■□□□□ 0
NME3-204ENST00000563498 ABCB10Q9NRK6 738 aa15.07■□□□□ 0
NME3-204ENST00000563498 KLHDC2Q9Y2U9 406 aa15.07■□□□□ 0
NME3-204ENST00000563498 C17orf98A8MV24 154 aa15.06■□□□□ 0
NME3-204ENST00000563498 ODF3BA8MYP8 253 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms