RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 OR8J1Q8NGP2 316 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 SGMS2Q8NHU3 365 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 H1FXQ92522 213 aaKnown RBP13.91□□□□□ -0.18
CLK3-210ENST00000563112 RBM4BQ9BQ04 359 aaKnown RBP13.91□□□□□ -0.18
CLK3-210ENST00000563112 GABARAPL3Q9BY60 117 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 ACOXLQ9NUZ1 547 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 DUX4Q9UBX2 424 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 MRM2Q9UI43 246 aaKnown RBP13.91□□□□□ -0.18
CLK3-210ENST00000563112 SAC3D1A6NKF1 404 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 OR2AT4A6NND4 320 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 MAGEB4O15481 346 aaPredicted RBP13.9□□□□□ -0.18
CLK3-210ENST00000563112 SRSF10O75494 262 aaKnown RBP13.9□□□□□ -0.18
CLK3-210ENST00000563112 RHBDL1O75783 438 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 ACAA1P09110 424 aaPredicted RBP13.9□□□□□ -0.18
CLK3-210ENST00000563112 OR2T7P0C7T2 308 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 AMY2BP19961 511 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 POLR2IP36954 125 aaKnown RBP13.9□□□□□ -0.18
CLK3-210ENST00000563112 CDC42P60953 191 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 TMED1Q13445 227 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 CLVS2Q5SYC1 327 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 HAGHLQ6PII5 290 aaPredicted RBP13.9□□□□□ -0.18
CLK3-210ENST00000563112 Q6YL49 198 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 VMO1Q7Z5L0 202 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 FGFRL1Q8N441 504 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 KIR3DL3Q8N743 410 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 OR2T27Q8NH04 317 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 ANGPTL6Q8NI99 470 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 AQP3Q92482 292 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 RFKQ969G6 155 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 GAFA1Q96PS6 74 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 TBX5Q99593 518 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 DCTN5Q9BTE1 182 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 ZNF747Q9BV97 191 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 RASL12Q9NYN1 266 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 SLC25A10Q9UBX3 287 aaPredicted RBP13.9□□□□□ -0.18
CLK3-210ENST00000563112 PCDHGB1Q9Y5G3 927 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 ORC6Q9Y5N6 252 aa13.9□□□□□ -0.18
CLK3-210ENST00000563112 SIGLEC5O15389 551 aa13.89□□□□□ -0.19
CLK3-210ENST00000563112 RPP14O95059 124 aaKnown RBP13.89□□□□□ -0.19
CLK3-210ENST00000563112 CRYBA1P05813 215 aa13.89□□□□□ -0.19
CLK3-210ENST00000563112 NDUFB7P17568 137 aa13.89□□□□□ -0.19
CLK3-210ENST00000563112 DMRTC1Q5HYR2 192 aa13.89□□□□□ -0.19
CLK3-210ENST00000563112 SHISA2Q6UWI4 295 aa13.89□□□□□ -0.19
CLK3-210ENST00000563112 PLEKHG7Q6ZR37 379 aa13.89□□□□□ -0.19
CLK3-210ENST00000563112 CCDC121Q6ZUS5 278 aa13.89□□□□□ -0.19
CLK3-210ENST00000563112 ZNF573Q86YE8 665 aa13.89□□□□□ -0.19
CLK3-210ENST00000563112 C10orf67Q8IYJ2 551 aa13.89□□□□□ -0.19
CLK3-210ENST00000563112 TMEM86BQ8N661 226 aa13.89□□□□□ -0.19
CLK3-210ENST00000563112 TBC1D15Q8TC07 691 aa13.89□□□□□ -0.19
CLK3-210ENST00000563112 PYDC1Q8WXC3 89 aa13.89□□□□□ -0.19
CLK3-210ENST00000563112 TNFRSF19Q9NS68 423 aa13.89□□□□□ -0.19
CLK3-210ENST00000563112 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.89□□□□□ -0.19
CLK3-210ENST00000563112 CAB39Q9Y376 341 aaPredicted RBP13.89□□□□□ -0.19
CLK3-210ENST00000563112 V9GYS6 101 aa13.89□□□□□ -0.19
CLK3-210ENST00000563112 METTL15A6NJ78 407 aa13.88□□□□□ -0.19
CLK3-210ENST00000563112 DHRS7CA6NNS2 312 aa13.88□□□□□ -0.19
CLK3-210ENST00000563112 POM121CA8CG34 1229 aa13.88□□□□□ -0.19
CLK3-210ENST00000563112 DLGAP1O14490 977 aa13.88□□□□□ -0.19
CLK3-210ENST00000563112 MELTFP08582 738 aa13.88□□□□□ -0.19
CLK3-210ENST00000563112 EEF1B2P24534 225 aaKnown RBP13.88□□□□□ -0.19
CLK3-210ENST00000563112 CAV3P56539 151 aa13.88□□□□□ -0.19
CLK3-210ENST00000563112 ASRGL1Q7L266 308 aa13.88□□□□□ -0.19
CLK3-210ENST00000563112 PDZD9Q8IXQ8 264 aa13.88□□□□□ -0.19
CLK3-210ENST00000563112 OR10H4Q8NGA5 316 aa13.88□□□□□ -0.19
CLK3-210ENST00000563112 C8orf46Q8TAG6 207 aa13.88□□□□□ -0.19
CLK3-210ENST00000563112 SSMEM1Q8WWF3 244 aa13.88□□□□□ -0.19
CLK3-210ENST00000563112 TRUB1Q8WWH5 349 aaKnown RBP13.88□□□□□ -0.19
CLK3-210ENST00000563112 ADI1Q9BV57 179 aa13.88□□□□□ -0.19
CLK3-210ENST00000563112 GPR173Q9NS66 373 aa13.88□□□□□ -0.19
CLK3-210ENST00000563112 IMPAD1Q9NX62 359 aa13.88□□□□□ -0.19
CLK3-210ENST00000563112 FAM96BQ9Y3D0 163 aa13.88□□□□□ -0.19
CLK3-210ENST00000563112 POMT1Q9Y6A1 747 aa13.88□□□□□ -0.19
CLK3-210ENST00000563112 A0A1B0GTI1 187 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 A0A1W2PQ09 198 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 A0A1W2PQL4 384 aaPredicted RBP13.87□□□□□ -0.19
CLK3-210ENST00000563112 SULT1C4O75897 302 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 PSG2P11465 335 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 SELLP14151 372 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 HAAOP46952 286 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 CAPZA1P52907 286 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 GUCA2AQ02747 115 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 BLMHQ13867 455 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 DGUOKQ16854 277 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 SMIM21Q3B7S5 101 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 TMEM42Q69YG0 159 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 ZFP1Q6P2D0 407 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 TMEM185AQ8NFB2 350 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 OR14K1Q8NGZ2 314 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 NPRL2Q8WTW4 380 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 EME1Q96AY2 570 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 UNKLQ9H9P5 680 aaKnown RBP13.87□□□□□ -0.19
CLK3-210ENST00000563112 PLEKHA1Q9HB21 404 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 SIRT7Q9NRC8 400 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 SLC22A13Q9Y226 551 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 POLDIP2Q9Y2S7 368 aa13.87□□□□□ -0.19
CLK3-210ENST00000563112 IGKV1D-17A0A075B6S4 117 aa13.86□□□□□ -0.19
CLK3-210ENST00000563112 J3QT63 122 aa13.86□□□□□ -0.19
CLK3-210ENST00000563112 APOL3O95236 402 aa13.86□□□□□ -0.19
CLK3-210ENST00000563112 TFF1P04155 84 aa13.86□□□□□ -0.19
CLK3-210ENST00000563112 ODF4Q2M2E3 257 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms