RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 IGHV1-69-2A0A0G2JMI3 117 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 K7EN84 100 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 ERI3O43414 337 aaKnown RBP8.28□□□□□ -1.08
CDH1-205ENST00000562836 DIRAS1O95057 198 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 SOAT1P35610 550 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 GLRXP35754 106 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 PTH2RP49190 550 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 TCL1AP56279 114 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 MZT1Q08AG7 82 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 SCAPQ12770 1279 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 KLF9Q13886 244 aaPredicted RBP8.28□□□□□ -1.08
CDH1-205ENST00000562836 NEGR1Q7Z3B1 354 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 NOXO1Q8NFA2 376 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 PEBP4Q96S96 227 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 FIZ1Q96SL8 496 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 EFCAB11Q9BUY7 163 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 EIF5A2Q9GZV4 153 aaKnown RBP8.28□□□□□ -1.08
CDH1-205ENST00000562836 GABARAPL1Q9H0R8 117 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 S1PR5Q9H228 398 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 TNFRSF12AQ9NP84 129 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 KCNJ16Q9NPI9 418 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 A0A096LPK6 155 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 ZNF850A8MQ14 1090 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 HYPMO75409 117 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 ZNF28P17035 718 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 RABGGTBP53611 331 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 PDGFRLQ15198 375 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 PAQR6Q6TCH4 344 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 ZNF595Q8IYB9 648 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 NPEPL1Q8NDH3 523 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 GRAPLQ8TC17 118 aaPredicted RBP8.28□□□□□ -1.08
CDH1-205ENST00000562836 VN1R17PQ8TDU5 208 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 LHX4Q969G2 390 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 OR10C1Q96KK4 312 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 NPVFQ9HCQ7 196 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 UBE2TQ9NPD8 197 aaPredicted RBP8.28□□□□□ -1.08
CDH1-205ENST00000562836 TMEM9BQ9NQ34 198 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 ASB6Q9NWX5 421 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 KIAA1456Q9P272 454 aa8.28□□□□□ -1.08
CDH1-205ENST00000562836 RALYQ9UKM9 306 aaKnown RBP8.28□□□□□ -1.08
CDH1-205ENST00000562836 MTCL1Q9Y4B5 1905 aaKnown RBP8.28□□□□□ -1.08
CDH1-205ENST00000562836 A0A0B4J2A0 478 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 A0A0G2JMM0 328 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 A0A1W2PPB8 328 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 ZNF860A6NHJ4 632 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 KIR3DP1A8MWS1 328 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.27□□□□□ -1.08
CDH1-205ENST00000562836 ENSAO43768 121 aaKnown RBP8.27□□□□□ -1.08
CDH1-205ENST00000562836 PPP1R11O60927 126 aaPredicted RBP8.27□□□□□ -1.08
CDH1-205ENST00000562836 CNMDO75829 334 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 MEF2BQ02080 365 aaPredicted RBP8.27□□□□□ -1.08
CDH1-205ENST00000562836 BTNL8Q6UX41 500 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 GPRIN1Q7Z2K8 1008 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 FAM219AQ8IW50 185 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 OR13G1Q8NGZ3 307 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 VSTM2LQ96N03 204 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 ANAPC13Q9BS18 74 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 GPR174Q9BXC1 333 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 C1QTNF4Q9BXJ3 329 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 PECRQ9BY49 303 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 SLC25A51Q9H1U9 297 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 ELL3Q9HB65 397 aaPredicted RBP8.27□□□□□ -1.08
CDH1-205ENST00000562836 SHPKQ9UHJ6 478 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 TRAPPC2LQ9UL33 140 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 ICAM5Q9UMF0 924 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 FNDC3AQ9Y2H6 1198 aaKnown RBP8.27□□□□□ -1.08
CDH1-205ENST00000562836 ROBO1Q9Y6N7 1651 aa8.27□□□□□ -1.08
CDH1-205ENST00000562836 A0A1W2PPC4 97 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 J3KR12 359 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 ZIC2O95409 532 aaPredicted RBP8.27□□□□□ -1.09
CDH1-205ENST00000562836 C1RP00736 705 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 IL5P05113 134 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 VSIG10L2P0DP72 767 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 HTR1FP30939 366 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 CX3CR1P49238 355 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 ATP4BP51164 291 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 RPL24P83731 157 aaKnown RBP8.27□□□□□ -1.09
CDH1-205ENST00000562836 PRSS45Q7RTY3 260 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 OR9G4Q8NGQ1 327 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 SIGLEC12Q96PQ1 595 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 KLRF1Q9NZS2 232 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 BOKQ9UMX3 212 aaPredicted RBP8.27□□□□□ -1.09
CDH1-205ENST00000562836 FUT9Q9Y231 359 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 STYXL1Q9Y6J8 313 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 DOT1LQ8TEK3 1739 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 TMEM272A0A1B0GTI8 110 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 SHISA3A0PJX4 238 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 ASPDHA6ND91 283 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 GAGE10A6NGK3 116 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 C19orf67A6NJJ6 358 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 C21orf140B9A014 251 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 ZNF865P0CJ78 1059 aaPredicted RBP8.27□□□□□ -1.09
CDH1-205ENST00000562836 UQCRFS1P47985 274 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 UCNP55089 124 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 PITX1P78337 314 aaPredicted RBP8.27□□□□□ -1.09
CDH1-205ENST00000562836 ZNF77Q15935 545 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 LRRC10Q5BKY1 277 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 ZNF474Q6S9Z5 364 aaPredicted RBP8.27□□□□□ -1.09
CDH1-205ENST00000562836 DPPA3Q6W0C5 159 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 MDGA2Q7Z553 956 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms