RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 SLC1A7O00341 560 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 PIN1P1O15428 100 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 GSC2O15499 205 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 DCTN3O75935 186 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 DCTDP32321 178 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 KIR2DS4P43632 304 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 BMXP51813 675 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 MNAT1P51948 309 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 FBLN7Q53RD9 439 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 FAM76BQ5HYJ3 339 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 DMRTC1Q5HYR2 192 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 HCP5Q6MZN7 132 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 HAGHLQ6PII5 290 aaPredicted RBP10.57□□□□□ -0.72
SF3B3-202ENST00000562722 MOB3CQ70IA8 216 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 LYG1Q8N1E2 194 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 FEVQ99581 238 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 OR51I2Q9H344 312 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 RANBP3Q9H6Z4 567 aaPredicted RBP10.57□□□□□ -0.72
SF3B3-202ENST00000562722 HEXA-AS1Q9H8Q6 139 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 KLHDC2Q9Y2U9 406 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 ARL2BPQ9Y2Y0 163 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 LRP12Q9Y561 859 aa10.57□□□□□ -0.72
SF3B3-202ENST00000562722 hCG_1809904A0A1W2PP81 198 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 A0A1W2PPE2 198 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 A0A1W2PR64 198 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 A0A1W2PRV1 198 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 OR5B21A6NL26 309 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 PSMD9O00233 223 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 GNGT2O14610 69 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 RPL31P62899 125 aaKnown RBP10.56□□□□□ -0.72
SF3B3-202ENST00000562722 RIPPLY1Q0D2K3 151 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 GINS1Q14691 196 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 SMIM21Q3B7S5 101 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 NSUN5P1Q3KNT7 163 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 CEACAM21Q3KPI0 293 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 PLA1AQ53H76 456 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 CD300LDQ6UXZ3 194 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 LIAT1Q6ZQX7 453 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 CPOQ8IVL8 374 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 DTX3Q8N9I9 347 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 AQP3Q92482 292 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 LRGUKQ96M69 825 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 MEGF9Q9H1U4 602 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 C1orf21Q9H246 121 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 MUC13Q9H3R2 512 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 ZNF222Q9UK12 451 aa10.56□□□□□ -0.72
SF3B3-202ENST00000562722 TMEM269A0A1B0GVZ9 245 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 RFPL4AA6NLU0 287 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 B2RBV5 119 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 RFPL4AL1F8VTS6 287 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 PRODHO43272 600 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 CHST1O43916 411 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 PEX14O75381 377 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 CST1P01037 141 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 FAHP16930 419 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 AANATQ16613 207 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 SAMD5Q5TGI4 173 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 LCN8Q6JVE9 175 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 KCTD18Q6PI47 426 aaPredicted RBP10.55□□□□□ -0.72
SF3B3-202ENST00000562722 ZNF782Q6ZMW2 699 aaPredicted RBP10.55□□□□□ -0.72
SF3B3-202ENST00000562722 BBS1Q8NFJ9 593 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 OR4S1Q8NGB4 309 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 OR4M1Q8NGD0 313 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 OR5A2Q8NGI9 324 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 OR5K1Q8NHB7 308 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 CFHR4Q92496 578 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 SDSLQ96GA7 329 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 ZNF488Q96MN9 340 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 TEX12Q9BXU0 123 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 MROQ9BYG7 248 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 ZNF556Q9HAH1 456 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 RASL12Q9NYN1 266 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 USE1Q9NZ43 259 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 ENPP5Q9UJA9 477 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 GTF2A1LQ9UNN4 478 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 PIGLQ9Y2B2 252 aa10.55□□□□□ -0.72
SF3B3-202ENST00000562722 A0A0U1RQV5 110 aa10.54□□□□□ -0.72
SF3B3-202ENST00000562722 FBXO24O75426 580 aa10.54□□□□□ -0.72
SF3B3-202ENST00000562722 E2F6O75461 281 aa10.54□□□□□ -0.72
SF3B3-202ENST00000562722 MTRF1O75570 445 aaKnown RBP10.54□□□□□ -0.72
SF3B3-202ENST00000562722 ALX3O95076 343 aa10.54□□□□□ -0.72
SF3B3-202ENST00000562722 HMGN1P05114 100 aa10.54□□□□□ -0.72
SF3B3-202ENST00000562722 MRPL3P09001 348 aaKnown RBP10.54□□□□□ -0.72
SF3B3-202ENST00000562722 RAP2AP10114 183 aa10.54□□□□□ -0.72
SF3B3-202ENST00000562722 PIPP12273 146 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-202ENST00000562722 CCL3L1P16619 93 aa10.54□□□□□ -0.72
SF3B3-202ENST00000562722 PRDX2P32119 198 aa10.54□□□□□ -0.72
SF3B3-202ENST00000562722 CEBPDP49716 269 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-202ENST00000562722 HCCSP53701 268 aa10.54□□□□□ -0.72
SF3B3-202ENST00000562722 ERVFRD-1P60508 538 aa10.54□□□□□ -0.72
SF3B3-202ENST00000562722 ESRRGP62508 458 aa10.54□□□□□ -0.72
SF3B3-202ENST00000562722 TRIM25Q14258 630 aaKnown RBP10.54□□□□□ -0.72
SF3B3-202ENST00000562722 GK3PQ14409 553 aa10.54□□□□□ -0.72
SF3B3-202ENST00000562722 ARSJQ5FYB0 599 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-202ENST00000562722 SLC35D3Q5M8T2 416 aa10.54□□□□□ -0.72
SF3B3-202ENST00000562722 ZNF684Q5T5D7 378 aa10.54□□□□□ -0.72
SF3B3-202ENST00000562722 KPRPQ5T749 579 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-202ENST00000562722 TMEM200BQ69YZ2 307 aa10.54□□□□□ -0.72
SF3B3-202ENST00000562722 ACP7Q6ZNF0 438 aa10.54□□□□□ -0.72
SF3B3-202ENST00000562722 REC114Q7Z4M0 266 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms