RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 VCYO14598 125 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 XKRYO14609 159 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 ABCD4O14678 606 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 LDLRAD4O15165 306 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 SPINT2O43291 252 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 GLCEO94923 617 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 UBL3O95164 117 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 BAG2O95816 211 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 RENP00797 406 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 CD8AP01732 235 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 HMGN1P05114 100 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 SERPINA5P05154 406 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 ADRA2AP08913 450 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 COX5BP10606 129 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 NR2C1P13056 603 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 MSR1P21757 451 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 PAX7P23759 505 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 PTAFRP25105 342 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 CRABP1P29762 137 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 WNT5AP41221 380 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 RPS27P42677 84 aaKnown RBP3.83□□□□□ -1.8
SMG1-206ENST00000562668 IDH3GP51553 393 aaPredicted RBP3.83□□□□□ -1.8
SMG1-206ENST00000562668 UBE2NP61088 152 aaKnown RBP3.83□□□□□ -1.8
SMG1-206ENST00000562668 RPP30P78346 268 aaKnown RBP3.83□□□□□ -1.8
SMG1-206ENST00000562668 HSF2Q03933 536 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 SLC34A1Q06495 639 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 AQP6Q13520 282 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 GGTLC2Q14390 218 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 TRIP10Q15642 601 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 SGCAQ16586 387 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 PABPC1L2AQ5JQF8 200 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 WDR38Q5JTN6 314 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 C11orf71Q6IPW1 123 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 ZNF774Q6NX45 483 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 PLBD1Q6P4A8 553 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 CORO6Q6QEF8 472 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 CFAP77Q6ZQR2 320 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 ZBTB49Q6ZSB9 765 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 SLC16A14Q7RTX9 510 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 DPPA2Q7Z7J5 298 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 ENTHD1Q8IYW4 607 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 PACRGLQ8N7B6 248 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 STPG4Q8N801 248 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 MAPK1IP1LQ8NDC0 245 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 OR2T4Q8NH00 348 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 AKR7LQ8NHP1 331 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 THAP6Q8TBB0 222 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 ST7LQ8TDW4 575 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 SMAP2Q8WU79 429 aaPredicted RBP3.83□□□□□ -1.8
SMG1-206ENST00000562668 STMN2Q93045 179 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 MUCL1Q96DR8 90 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 LURAP1Q96LR2 239 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 RDH12Q96NR8 316 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 TEAD3Q99594 435 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 NDEL1Q9GZM8 345 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 RIBC2Q9H4K1 309 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 DCLRE1BQ9H816 532 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 RNPEPL1Q9HAU8 725 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 SEBOXQ9HB31 216 aaPredicted RBP3.83□□□□□ -1.8
SMG1-206ENST00000562668 TVP23BQ9NYZ1 205 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 AASSQ9UDR5 926 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 KLHDC2Q9Y2U9 406 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 RNF115Q9Y4L5 304 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 ABCA12Q86UK0 2595 aa3.83□□□□□ -1.8
SMG1-206ENST00000562668 FLNBO75369 2602 aaKnown RBP3.82□□□□□ -1.8
SMG1-206ENST00000562668 CADP27708 2225 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 LOC100130705A0A1B0GUX0 176 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 C5orf63A6NC05 138 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 RIIAD1A6NNX1 92 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 C12orf71A8MTZ7 269 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 HS3ST1O14792 307 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 CASKO14936 926 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 RER1O15258 196 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 TPD52L2O43399 206 aaKnown RBP3.82□□□□□ -1.8
SMG1-206ENST00000562668 TLX2O43763 284 aaPredicted RBP3.82□□□□□ -1.8
SMG1-206ENST00000562668 GPRIN2O60269 458 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 SELENOFO60613 162 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 SRSF10O75494 262 aaKnown RBP3.82□□□□□ -1.8
SMG1-206ENST00000562668 WBP4O75554 376 aaKnown RBP3.82□□□□□ -1.8
SMG1-206ENST00000562668 FARS2O95363 451 aaKnown RBP3.82□□□□□ -1.8
SMG1-206ENST00000562668 ATP6V1G2O95670 118 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 NGFP01138 241 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 IFNGP01579 166 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 SOD3P08294 240 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 CD79AP11912 226 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 CCL2P13500 99 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 ZNF3P17036 446 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 OTX1P32242 354 aaPredicted RBP3.82□□□□□ -1.8
SMG1-206ENST00000562668 RAD23AP54725 363 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 SNRPGP62308 76 aaKnown RBP3.82□□□□□ -1.8
SMG1-206ENST00000562668 GNB1P62873 340 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 GLO1Q04760 184 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 RAB35Q15286 201 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 ADIPOQQ15848 244 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 SNAPC1Q16533 368 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 LRRC36Q1X8D7 754 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 TMEM95Q3KNT9 176 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 SLC36A2Q495M3 483 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 SLC35D3Q5M8T2 416 aa3.82□□□□□ -1.8
SMG1-206ENST00000562668 C6orf141Q5SZD1 244 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms