RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 MASP2O00187 686 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 DFFBO76075 338 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 MMP7P09237 267 aaPredicted RBP12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 IL15RAQ13261 267 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 TRA2AQ13595 282 aaKnown RBP eCLIP12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 HAGHQ16775 308 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 HIKESHIQ53FT3 197 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 SHDQ96IW2 340 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 A0A0A6YYH2 397 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 A6NJ64 397 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 ZNF217O75362 1048 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 IGKV1D-16P01601 117 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 RPS4Y1P22090 263 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 CD27P26842 260 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 CAPZBP47756 277 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 SUPT4H1P63272 117 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 FAM53BQ14153 422 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 OTPQ5XKR4 325 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 CDC20BQ86Y33 519 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 TMEM183AQ8IXX5 376 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 OR51A2Q8NGJ7 313 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 CTHRC1Q96CG8 243 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 CKLFQ9UBR5 152 aa12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 A0A1W2PR77 199 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 TLCD2A6NGC4 264 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 RPLP1P05386 114 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 OR4A8P0C604 315 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 SEC11BP0C7V7 166 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 BCKDHBP21953 392 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 CLDN6P56747 220 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 SPOCK1Q08629 439 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 SAPCD1Q5SSQ6 148 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 ARHGEF39Q8N4T4 335 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 SLC35G3Q8N808 338 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 SH3BGRL3Q9H299 93 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 DHDHQ9UQ10 334 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 MEMO1Q9Y316 297 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 HSD17B6O14756 317 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 MDKP21741 143 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 GLIPR1P48060 266 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 EMDP50402 254 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 ARSJQ5FYB0 599 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 ZNF429Q86V71 674 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 APCDD1LQ8NCL9 501 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 OR4K15Q8NH41 348 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 FAM213BQ8TBF2 198 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 ZNF385AQ96PM9 386 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 AMELYQ99218 206 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 WDR76Q9H967 626 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 FOXD3Q9UJU5 478 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 GPR132Q9UNW8 380 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 EML5Q05BV3 1969 aa12.39□□□□□ -0.43
GTF3C1-203ENST00000562609 ARPC3O15145 178 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 LDLRAD4O15165 306 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 SLC35E2P0CK97 266 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 PNLIPP16233 465 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 GNB3P16520 340 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 OR1D4P47884 311 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 AARDQ4LEZ3 155 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 LCN10Q6JVE6 187 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 DCXRQ7Z4W1 244 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 H7C1C5 153 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 ATXN7O15265 892 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 CXCR1P25024 350 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 GNALP38405 381 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 OR3A1P47881 315 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 FOXL2P58012 376 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 ERVFC1-1P60608 527 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 LCN6P62502 163 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 HERPUD1Q15011 391 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 PRTGQ2VWP7 1150 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 FAM46BQ96A09 425 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 LSM5Q9Y4Y9 91 aaKnown RBP12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 GCGP01275 180 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 ALOX5APP20292 161 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 PI4KAP42356 2102 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 FASLGP48023 281 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 OR1D5P58170 312 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 CCL20P78556 96 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 PAX5Q02548 391 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 CLN3Q13286 438 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 RAB35Q15286 201 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 IAH1Q2TAA2 248 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 AADACL3Q5VUY0 350 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 NCR3LG1Q68D85 454 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 PTCRAQ6ISU1 281 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 TEX38Q6PEX7 206 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 Q7L0L9 218 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 RTN4RL2Q86UN3 420 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 C1orf87Q8N0U7 546 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 PRRX2Q99811 253 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 MKKSQ9NPJ1 570 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 PRTFDC1Q9NRG1 225 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 CLDN16Q9Y5I7 305 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 FREM2Q5SZK8 3169 aa12.38□□□□□ -0.43
GTF3C1-203ENST00000562609 MPDZO75970 2070 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 ZDBF2Q9HCK1 2354 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 TMEM131Q92545 1883 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms