RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 ING4Q9UNL4 249 aa12.24□□□□□ -0.45
COMMD4-205ENST00000562310 MRPS7Q9Y2R9 242 aaKnown RBP12.24□□□□□ -0.45
COMMD4-205ENST00000562310 A0A1W2PQ09 198 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 GABARAPH6UMI1 98 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 TIMM8AO60220 97 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-205ENST00000562310 CRTAPO75718 401 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-205ENST00000562310 CYB5AP00167 134 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 THBDP07204 575 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 AGAP20933 346 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 MPV17P39210 176 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 MZT1Q08AG7 82 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 PLA2G7Q13093 441 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 PDZK1IP1Q13113 114 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 MADCAM1Q13477 382 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 RSU1Q15404 277 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 BAK1Q16611 211 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 SLC22A6Q4U2R8 563 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 RNF144BQ7Z419 303 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 ZNF573Q86YE8 665 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 IZUMO1Q8IYV9 350 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 SPERTQ8NA61 448 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 C19orf18Q8NEA5 215 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 OR8G5Q8NG78 346 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 OR8S1Q8NH09 359 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 POM121Q96HA1 1249 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 RNF170Q96K19 258 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 ABHD1Q96SE0 405 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 ADAT1Q9BUB4 502 aaKnown RBP12.23□□□□□ -0.45
COMMD4-205ENST00000562310 CRIM1Q9NZV1 1036 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 NDRG3Q9UGV2 375 aa12.23□□□□□ -0.45
COMMD4-205ENST00000562310 COL6A6A6NMZ7 2263 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 TMEM210A6NLX4 147 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 ZNF732B4DXR9 585 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 ATP6V1G2-DDX39BF2Z307 99 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 MPIG6BO95866 241 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 PTTG1O95997 202 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 CSTBP04080 98 aaKnown RBP12.22□□□□□ -0.45
COMMD4-205ENST00000562310 ZNF250P15622 560 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 MGMTP16455 207 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 CA6P23280 308 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 GPM6AP51674 278 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 RPS27AP62979 156 aaKnown RBP12.22□□□□□ -0.45
COMMD4-205ENST00000562310 TLE1Q04724 770 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 ASAH1Q13510 395 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 DMRTC1Q5HYR2 192 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 OR10K2Q6IF99 312 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 TMEM200AQ86VY9 491 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 SNX29P2Q8IUI4 249 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 MKXQ8IYA7 352 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 ZNF808Q8N4W9 903 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-205ENST00000562310 ZNF611Q8N823 705 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 DTX3Q8N9I9 347 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 OR56B1Q8NGI3 324 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 CHPT1Q8WUD6 406 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 TRIM63Q969Q1 353 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 MRPS24Q96EL2 167 aaKnown RBP12.22□□□□□ -0.45
COMMD4-205ENST00000562310 THAP7Q9BT49 309 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-205ENST00000562310 TM2D1Q9BX74 207 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 PKIBQ9C010 78 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 ESRP2Q9H6T0 727 aaKnown RBP12.22□□□□□ -0.45
COMMD4-205ENST00000562310 ELL3Q9HB65 397 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-205ENST00000562310 TMEM100Q9NV29 134 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 NKIRAS2Q9NYR9 191 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 PCNX1Q96RV3 2341 aa12.22□□□□□ -0.45
COMMD4-205ENST00000562310 SPENQ96T58 3664 aaKnown RBP12.21□□□□□ -0.45
COMMD4-205ENST00000562310 TRAV18A0A075B6X5 111 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 A0A1B0GWJ7 208 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 LRP5LA4QPB2 252 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 SULT1C2O00338 296 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 LILRA1O75019 489 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 GTF2F2P13984 249 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 SERPINA2P20848 420 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 CPT2P23786 658 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 KLF3P57682 345 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-205ENST00000562310 SELENOVP59797 346 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 ESPL1Q14674 2120 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 ARL6IP1Q15041 203 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 OR8G1Q15617 311 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 POC5Q8NA72 575 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 ACBD4Q8NC06 268 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 TMEM104Q8NE00 496 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 PRR7Q8TB68 274 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 FCAMRQ8WWV6 532 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 ZC3HAV1LQ96H79 300 aaKnown RBP12.21□□□□□ -0.45
COMMD4-205ENST00000562310 RADILQ96JH8 1075 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 WFIKKN1Q96NZ8 548 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 LPAR5Q9H1C0 372 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 ZNF442Q9H7R0 627 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 SCPEP1Q9HB40 452 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 RHOFQ9HBH0 211 aa12.21□□□□□ -0.45
COMMD4-205ENST00000562310 MYEF2Q9P2K5 600 aaKnown RBP12.21□□□□□ -0.45
COMMD4-205ENST00000562310 PRR14LQ5THK1 2151 aa12.2□□□□□ -0.46
COMMD4-205ENST00000562310 NKX2-6A6NCS4 301 aa12.2□□□□□ -0.46
COMMD4-205ENST00000562310 J3QT63 122 aa12.2□□□□□ -0.46
COMMD4-205ENST00000562310 RAB27BO00194 218 aa12.2□□□□□ -0.46
COMMD4-205ENST00000562310 AKR7A2O43488 359 aa12.2□□□□□ -0.46
COMMD4-205ENST00000562310 SPRY1O43609 319 aaPredicted RBP12.2□□□□□ -0.46
COMMD4-205ENST00000562310 PLATP00750 562 aa12.2□□□□□ -0.46
COMMD4-205ENST00000562310 IGHV3-13P01766 116 aa12.2□□□□□ -0.46
COMMD4-205ENST00000562310 GNLYP22749 145 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms