RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 FKBP11Q9NYL4 201 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 TRBV11-1A0A0K0K1C0 115 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 LDB3O75112 727 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 HSPB1P04792 205 aaKnown RBP16.49■□□□□ 0.23
RAB40C-206ENST00000561781 CISD3P0C7P0 127 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 WASP42768 502 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 COL10A1Q03692 680 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 PMS2P11Q13670 270 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 ZNF260Q3ZCT1 412 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 ALG10BQ5I7T1 473 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 GLYATL3Q5SZD4 288 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 DTWD2Q8NBA8 298 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 SLC26A10Q8NG04 563 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 STT3BQ8TCJ2 826 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 LINC00615Q96LM1 132 aaPredicted RBP16.49■□□□□ 0.23
RAB40C-206ENST00000561781 MIEN1Q9BRT3 115 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 DEC1Q9P2X7 70 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 OSGIN2Q9Y236 505 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 HEATR5AQ86XA9 2040 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 A0A1B0GV50 99 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 CEACAM18A8MTB9 384 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 RND3P61587 244 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 BTG2P78543 158 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 DMWDQ09019 674 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 ZIC1Q15915 447 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 ASPHD2Q6ICH7 369 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 ADIPOR2Q86V24 386 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 COX18Q8N8Q8 333 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 DCBLD2Q96PD2 775 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 KIAA1456Q9P272 454 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 SRPK3Q9UPE1 567 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 ZNF264O43296 627 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 KAT7O95251 611 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 UMODP07911 640 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 APOBEC1P41238 236 aaKnown RBP16.48■□□□□ 0.23
RAB40C-206ENST00000561781 RPS27P42677 84 aaKnown RBP16.48■□□□□ 0.23
RAB40C-206ENST00000561781 TNFSF10P50591 281 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 RAB7AP51149 207 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 PRPS1P60891 318 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 TMEM241Q24JQ0 296 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 C2orf27AQ580R0 203 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 DPY19L2P2Q6ZN68 376 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 ZNF100Q8IYN0 542 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 FAM3CQ92520 227 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 CKLFQ9UBR5 152 aa16.48■□□□□ 0.23
RAB40C-206ENST00000561781 HSPB2A8KAH6 182 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 K7N7A8 449 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 PPBPP02775 128 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 PTTG1IPP53801 180 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 ZXDAP98168 799 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 HSPB2Q16082 182 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 NKAIN1Q4KMZ8 207 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 GCNT2Q8N0V5 402 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 AGBL5Q8NDL9 886 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 ERGIC1Q969X5 290 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 CABLES2Q9BTV7 478 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 ELOVL1Q9BW60 279 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 PRR13Q9NZ81 148 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 FOXJ2Q9P0K8 574 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 ZNF217O75362 1048 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 CYB5R3P00387 301 aaPredicted RBP16.47■□□□□ 0.23
RAB40C-206ENST00000561781 LCATP04180 440 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 ZNF888P0CJ79 500 aaPredicted RBP16.47■□□□□ 0.23
RAB40C-206ENST00000561781 BCKDHBP21953 392 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 CDKN2AP42771 156 aaKnown RBP16.47■□□□□ 0.23
RAB40C-206ENST00000561781 SUPT4H1P63272 117 aaKnown RBP16.47■□□□□ 0.23
RAB40C-206ENST00000561781 PNRC1Q12796 327 aaPredicted RBP16.47■□□□□ 0.23
RAB40C-206ENST00000561781 CACUL1Q86Y37 369 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 LRRC25Q8N386 305 aaPredicted RBP16.47■□□□□ 0.23
RAB40C-206ENST00000561781 NKAIN3Q8N8D7 197 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 CYB561D1Q8N8Q1 229 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 NUDT10Q8NFP7 164 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 CMKLR1Q99788 373 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 NAGKQ9UJ70 344 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 WSB1Q9Y6I7 421 aa16.47■□□□□ 0.23
RAB40C-206ENST00000561781 K7EQS6 105 aa16.46■□□□□ 0.23
RAB40C-206ENST00000561781 CEACAM8P31997 349 aaPredicted RBP16.46■□□□□ 0.23
RAB40C-206ENST00000561781 GPR1P46091 355 aa16.46■□□□□ 0.23
RAB40C-206ENST00000561781 SPOCK1Q08629 439 aa16.46■□□□□ 0.23
RAB40C-206ENST00000561781 NRSN1Q8IZ57 195 aa16.46■□□□□ 0.23
RAB40C-206ENST00000561781 ALKBH3Q96Q83 286 aaPredicted RBP16.46■□□□□ 0.23
RAB40C-206ENST00000561781 C20orf144Q9BQM9 153 aa16.46■□□□□ 0.23
RAB40C-206ENST00000561781 COL25A1Q9BXS0 654 aaPredicted RBP16.46■□□□□ 0.23
RAB40C-206ENST00000561781 TRIM2Q9C040 744 aa16.46■□□□□ 0.23
RAB40C-206ENST00000561781 MRPS18BQ9Y676 258 aaKnown RBP16.46■□□□□ 0.23
RAB40C-206ENST00000561781 CXorf51AA0A1B0GTR3 108 aa16.46■□□□□ 0.23
RAB40C-206ENST00000561781 ZNF860A6NHJ4 632 aa16.46■□□□□ 0.23
RAB40C-206ENST00000561781 MBPP02686 304 aaPredicted RBP16.46■□□□□ 0.23
RAB40C-206ENST00000561781 CLDN6P56747 220 aa16.46■□□□□ 0.23
RAB40C-206ENST00000561781 ATP6V1FQ16864 119 aa16.46■□□□□ 0.23
RAB40C-206ENST00000561781 IAH1Q2TAA2 248 aaPredicted RBP16.46■□□□□ 0.23
RAB40C-206ENST00000561781 TRMT12Q53H54 448 aaKnown RBP16.46■□□□□ 0.23
RAB40C-206ENST00000561781 WDR38Q5JTN6 314 aa16.46■□□□□ 0.23
RAB40C-206ENST00000561781 SLC25A24Q6NUK1 477 aa16.46■□□□□ 0.23
RAB40C-206ENST00000561781 CDC20BQ86Y33 519 aa16.46■□□□□ 0.23
RAB40C-206ENST00000561781 OR4N5Q8IXE1 308 aa16.46■□□□□ 0.23
RAB40C-206ENST00000561781 TMEM156Q8N614 296 aa16.46■□□□□ 0.23
RAB40C-206ENST00000561781 CGGBP1Q9UFW8 167 aaPredicted RBP16.46■□□□□ 0.23
RAB40C-206ENST00000561781 FIGNL2A6NMB9 653 aa16.45■□□□□ 0.22
RAB40C-206ENST00000561781 CHRNB4P30926 498 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms