RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 TMEM69Q5SWH9 247 aa8.82□□□□□ -1
USP3-219ENST00000561326 NCMAPQ5T1S8 102 aa8.82□□□□□ -1
USP3-219ENST00000561326 SAXO1Q8IYX7 474 aa8.82□□□□□ -1
USP3-219ENST00000561326 OR8H2Q8N162 312 aa8.82□□□□□ -1
USP3-219ENST00000561326 ZNF843Q8N446 348 aa8.82□□□□□ -1
USP3-219ENST00000561326 PXT1Q8NFP0 134 aa8.82□□□□□ -1
USP3-219ENST00000561326 LINC01560Q8TB33 94 aa8.82□□□□□ -1
USP3-219ENST00000561326 FAM46BQ96A09 425 aa8.82□□□□□ -1
USP3-219ENST00000561326 MRPS24Q96EL2 167 aaKnown RBP8.82□□□□□ -1
USP3-219ENST00000561326 POM121Q96HA1 1249 aa8.82□□□□□ -1
USP3-219ENST00000561326 FZR1Q9UM11 496 aa8.82□□□□□ -1
USP3-219ENST00000561326 MRPS7Q9Y2R9 242 aaKnown RBP8.82□□□□□ -1
USP3-219ENST00000561326 ATP23Q9Y6H3 246 aa8.82□□□□□ -1
USP3-219ENST00000561326 CFAP46Q8IYW2 2715 aa8.82□□□□□ -1
USP3-219ENST00000561326 ANKHD1Q8IWZ3 2542 aaKnown RBP8.81□□□□□ -1
USP3-219ENST00000561326 TMEM210A6NLX4 147 aa8.81□□□□□ -1
USP3-219ENST00000561326 TMEM14DPA8MWL7 114 aa8.81□□□□□ -1
USP3-219ENST00000561326 LDLRAD4O15165 306 aa8.81□□□□□ -1
USP3-219ENST00000561326 XRCC3O43542 346 aa8.81□□□□□ -1
USP3-219ENST00000561326 CRTAPO75718 401 aaPredicted RBP8.81□□□□□ -1
USP3-219ENST00000561326 CHRM2P08172 466 aa8.81□□□□□ -1
USP3-219ENST00000561326 VSIG8P0DPA2 414 aa8.81□□□□□ -1
USP3-219ENST00000561326 CDK2P24941 298 aa8.81□□□□□ -1
USP3-219ENST00000561326 INPP1P49441 399 aa8.81□□□□□ -1
USP3-219ENST00000561326 ZP1P60852 638 aa8.81□□□□□ -1
USP3-219ENST00000561326 VHLLQ6RSH7 139 aa8.81□□□□□ -1
USP3-219ENST00000561326 ASCL4Q6XD76 172 aa8.81□□□□□ -1
USP3-219ENST00000561326 TMEM200AQ86VY9 491 aa8.81□□□□□ -1
USP3-219ENST00000561326 Q8N402 240 aa8.81□□□□□ -1
USP3-219ENST00000561326 OR5D18Q8NGL1 313 aa8.81□□□□□ -1
USP3-219ENST00000561326 OR51F2Q8NH61 342 aa8.81□□□□□ -1
USP3-219ENST00000561326 TMEM171Q8WVE6 324 aa8.81□□□□□ -1
USP3-219ENST00000561326 ITLN2Q8WWU7 325 aaPredicted RBP8.81□□□□□ -1
USP3-219ENST00000561326 ITPKCQ96DU7 683 aa8.81□□□□□ -1
USP3-219ENST00000561326 SLC25A38Q96DW6 304 aa8.81□□□□□ -1
USP3-219ENST00000561326 PLPPR2Q96GM1 343 aa8.81□□□□□ -1
USP3-219ENST00000561326 BBC3Q96PG8 261 aaPredicted RBP8.81□□□□□ -1
USP3-219ENST00000561326 ADAT1Q9BUB4 502 aaKnown RBP8.81□□□□□ -1
USP3-219ENST00000561326 SRRQ9GZT4 340 aa8.81□□□□□ -1
USP3-219ENST00000561326 PPP1R3EQ9H7J1 279 aa8.81□□□□□ -1
USP3-219ENST00000561326 ZNF442Q9H7R0 627 aa8.81□□□□□ -1
USP3-219ENST00000561326 CA10Q9NS85 328 aa8.81□□□□□ -1
USP3-219ENST00000561326 MYEF2Q9P2K5 600 aaKnown RBP8.81□□□□□ -1
USP3-219ENST00000561326 V9GYH0 126 aa8.81□□□□□ -1
USP3-219ENST00000561326 ROS1P08922 2347 aa8.81□□□□□ -1
USP3-219ENST00000561326 SPENQ96T58 3664 aaKnown RBP8.8□□□□□ -1
USP3-219ENST00000561326 IGLV3-9A0A075B6K5 115 aa8.8□□□□□ -1
USP3-219ENST00000561326 IGKV1-27A0A075B6S5 117 aa8.8□□□□□ -1
USP3-219ENST00000561326 A0A0G2JMP0 313 aa8.8□□□□□ -1
USP3-219ENST00000561326 A0A0X1KG70 313 aa8.8□□□□□ -1
USP3-219ENST00000561326 ISPDA4D126 451 aa8.8□□□□□ -1
USP3-219ENST00000561326 TRAPPC2LH3BP13 241 aa8.8□□□□□ -1
USP3-219ENST00000561326 H3BUI4 141 aa8.8□□□□□ -1
USP3-219ENST00000561326 LILRA1O75019 489 aa8.8□□□□□ -1
USP3-219ENST00000561326 CTAG2O75638 210 aa8.8□□□□□ -1
USP3-219ENST00000561326 UPK1BO75841 260 aa8.8□□□□□ -1
USP3-219ENST00000561326 HTR3BO95264 441 aa8.8□□□□□ -1
USP3-219ENST00000561326 MPIG6BO95866 241 aa8.8□□□□□ -1
USP3-219ENST00000561326 PRB1P04280 392 aa8.8□□□□□ -1
USP3-219ENST00000561326 GTF2F2P13984 249 aa8.8□□□□□ -1
USP3-219ENST00000561326 MNDAP41218 407 aa8.8□□□□□ -1
USP3-219ENST00000561326 KIR2DL3P43628 341 aa8.8□□□□□ -1
USP3-219ENST00000561326 HAAOP46952 286 aa8.8□□□□□ -1
USP3-219ENST00000561326 MMP15P51511 669 aa8.8□□□□□ -1
USP3-219ENST00000561326 DEFA1P59665 94 aa8.8□□□□□ -1
USP3-219ENST00000561326 DEFA3P59666 94 aa8.8□□□□□ -1
USP3-219ENST00000561326 MRPS10P82664 201 aaKnown RBP8.8□□□□□ -1
USP3-219ENST00000561326 QRFPP83859 136 aa8.8□□□□□ -1
USP3-219ENST00000561326 SCN1BQ07699 218 aa8.8□□□□□ -1
USP3-219ENST00000561326 ARL6IP1Q15041 203 aa8.8□□□□□ -1
USP3-219ENST00000561326 ALKBH6Q3KRA9 238 aa8.8□□□□□ -1
USP3-219ENST00000561326 SLC25A26Q70HW3 274 aa8.8□□□□□ -1
USP3-219ENST00000561326 ZNF611Q8N823 705 aa8.8□□□□□ -1
USP3-219ENST00000561326 C19orf18Q8NEA5 215 aa8.8□□□□□ -1
USP3-219ENST00000561326 OR4M2Q8NGB6 313 aa8.8□□□□□ -1
USP3-219ENST00000561326 OR56B1Q8NGI3 324 aa8.8□□□□□ -1
USP3-219ENST00000561326 OR51T1Q8NGJ9 327 aa8.8□□□□□ -1
USP3-219ENST00000561326 HPSE2Q8WWQ2 592 aa8.8□□□□□ -1
USP3-219ENST00000561326 FCAMRQ8WWV6 532 aa8.8□□□□□ -1
USP3-219ENST00000561326 MRPL24Q96A35 216 aaKnown RBP8.8□□□□□ -1
USP3-219ENST00000561326 NKX3-1Q99801 234 aaPredicted RBP8.8□□□□□ -1
USP3-219ENST00000561326 TMEM59Q9BXS4 323 aa8.8□□□□□ -1
USP3-219ENST00000561326 PKIBQ9C010 78 aa8.8□□□□□ -1
USP3-219ENST00000561326 CXXC4Q9H2H0 198 aa8.8□□□□□ -1
USP3-219ENST00000561326 RHOFQ9HBH0 211 aa8.8□□□□□ -1
USP3-219ENST00000561326 ABCB10Q9NRK6 738 aa8.8□□□□□ -1
USP3-219ENST00000561326 IL36GQ9NZH8 169 aa8.8□□□□□ -1
USP3-219ENST00000561326 ZDHHC8Q9ULC8 765 aa8.8□□□□□ -1
USP3-219ENST00000561326 ABCA4P78363 2273 aa8.79□□□□□ -1
USP3-219ENST00000561326 DYSFO75923 2080 aa8.79□□□□□ -1
USP3-219ENST00000561326 ZFYVE26Q68DK2 2539 aa8.79□□□□□ -1
USP3-219ENST00000561326 TRAV18A0A075B6X5 111 aa8.79□□□□□ -1
USP3-219ENST00000561326 LRP5LA4QPB2 252 aa8.79□□□□□ -1
USP3-219ENST00000561326 PRSS44E7EML9 344 aa8.79□□□□□ -1
USP3-219ENST00000561326 J3QT63 122 aa8.79□□□□□ -1
USP3-219ENST00000561326 CTDSPLO15194 276 aa8.79□□□□□ -1
USP3-219ENST00000561326 SPRY1O43609 319 aaPredicted RBP8.79□□□□□ -1
USP3-219ENST00000561326 CDC14BO60729 498 aa8.79□□□□□ -1
USP3-219ENST00000561326 PLATP00750 562 aa8.79□□□□□ -1
USP3-219ENST00000561326 MGMTP16455 207 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms