RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ACOT2P49753 483 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 CDK9P50750 372 aaKnown RBP1.62□□□□□ -2.15
RTF1-207ENST00000561076 UBE2E1P51965 193 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 NCBP2P52298 156 aaKnown RBP eCLIP1.62□□□□□ -2.15
RTF1-207ENST00000561076 SLC18A1P54219 525 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 CDKN2DP55273 166 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 RWDD2BP57060 319 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 TCTAP57738 103 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 OR10A3P58181 314 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 SPCS3P61009 180 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 CACNG7P62955 275 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 DYNLL1P63167 89 aaKnown RBP1.62□□□□□ -2.15
RTF1-207ENST00000561076 MS4A2Q01362 244 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 PRDX1Q06830 199 aaKnown RBP1.62□□□□□ -2.15
RTF1-207ENST00000561076 DPTQ07507 201 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 KRR1Q13601 381 aaKnown RBP1.62□□□□□ -2.15
RTF1-207ENST00000561076 SMCO1Q147U7 214 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 PMVKQ15126 192 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 TSNQ15631 228 aaKnown RBP1.62□□□□□ -2.15
RTF1-207ENST00000561076 C17orf58Q2M2W7 97 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 ZFP69Q49AA0 526 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 ZCWPW2Q504Y3 356 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 YIF1BQ5BJH7 314 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 TCEAL5Q5H9L2 206 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 OR2B11Q5JQS5 317 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 NHLRC3Q5JS37 347 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 FAM182AQ5T1J6 154 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 C9orf66Q5T8R8 295 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 ZNF530Q6P9A1 599 aaPredicted RBP1.62□□□□□ -2.15
RTF1-207ENST00000561076 EPGNQ6UW88 154 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 PRSS57Q6UWY2 283 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 TEX43Q6ZNM6 134 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 ZNF493Q6ZR52 646 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 Q6ZRP5 223 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 Q6ZSR6 202 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 Q6ZVH6 145 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 FAM183BPQ6ZVS7 135 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 USP43Q70EL4 1123 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 STRADAQ7RTN6 431 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 OLIG3Q7RTU3 272 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 TMEM179BQ7Z7N9 219 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 GALNT10Q86SR1 603 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 CBLN2Q8IUK8 224 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 CPNE9Q8IYJ1 553 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 KIR2DL5AQ8N109 375 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 ARRDC1Q8N5I2 433 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 FAM71E2Q8N5Q1 922 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 TMEM161BQ8NDZ6 487 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 ZNF680Q8NEM1 530 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 KIR2DL5BQ8NHK3 375 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 SPATA3Q8NHX4 192 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 MCFD2Q8NI22 146 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 FLVCR1-AS1Q8TAF5 88 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 ZNF420Q8TAQ5 688 aaPredicted RBP1.62□□□□□ -2.15
RTF1-207ENST00000561076 C11orf45Q8TAV5 145 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 PHOSPHO2Q8TCD6 241 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 CHCHD10Q8WYQ3 142 aaPredicted RBP1.62□□□□□ -2.15
RTF1-207ENST00000561076 RGP1Q92546 391 aaPredicted RBP1.62□□□□□ -2.15
RTF1-207ENST00000561076 RDH5Q92781 318 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 TCEAL3Q969E4 200 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 ZNF524Q96C55 264 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 FBXO17Q96EF6 278 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 SMIM8Q96KF7 97 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 CEP170P1Q96L14 293 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 UBE2E2Q96LR5 201 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 QKIQ96PU8 341 aaKnown RBP eCLIP1.62□□□□□ -2.15
RTF1-207ENST00000561076 NODALQ96S42 347 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 PRRT1Q99946 306 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 ANAPC13Q9BS18 74 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 RNF126Q9BV68 326 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 EMC6Q9BV81 110 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 MRPL20Q9BYC9 149 aaKnown RBP1.62□□□□□ -2.15
RTF1-207ENST00000561076 ULBP3Q9BZM4 244 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 TRIM15Q9C019 465 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 FAM107BQ9H098 131 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 SLC25A31Q9H0C2 315 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 PARP12Q9H0J9 701 aaKnown RBP1.62□□□□□ -2.15
RTF1-207ENST00000561076 C20orf85Q9H1P6 137 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 OR51E2Q9H255 320 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 OR51B5Q9H339 312 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 SRMSQ9H3Y6 488 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 HEXA-AS1Q9H8Q6 139 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 ZDHHC11Q9H8X9 412 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 SH2D2AQ9NP31 389 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 RRAGDQ9NQL2 400 aaPredicted RBP1.62□□□□□ -2.15
RTF1-207ENST00000561076 RBM22Q9NW64 420 aaKnown RBP eCLIP1.62□□□□□ -2.15
RTF1-207ENST00000561076 IL17CQ9P0M4 197 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 DOK5Q9P104 306 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 XCL2Q9UBD3 114 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 MTFP1Q9UDX5 166 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 PRO0628Q9UI54 55 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 CD84Q9UIB8 345 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 ANGPT4Q9Y264 503 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 ZNF256Q9Y2P7 627 aaPredicted RBP1.62□□□□□ -2.15
RTF1-207ENST00000561076 SIGLEC9Q9Y336 463 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 MOB4Q9Y3A3 225 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 FAM32AQ9Y421 112 aaKnown RBP1.62□□□□□ -2.15
RTF1-207ENST00000561076 MMACHCQ9Y4U1 282 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 UBIAD1Q9Y5Z9 338 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 ALG5Q9Y673 324 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms