RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 PNLDC1Q8NA58 520 aaKnown RBP10.78□□□□□ -0.68
CTDSPL2-209ENST00000560620 OR14K1Q8NGZ2 314 aa10.78□□□□□ -0.68
CTDSPL2-209ENST00000560620 RHOXF1Q8NHV9 184 aa10.78□□□□□ -0.68
CTDSPL2-209ENST00000560620 TRMT10AQ8TBZ6 339 aaKnown RBP10.78□□□□□ -0.68
CTDSPL2-209ENST00000560620 H1FXQ92522 213 aaKnown RBP10.78□□□□□ -0.68
CTDSPL2-209ENST00000560620 TMIGD2Q96BF3 282 aa10.78□□□□□ -0.68
CTDSPL2-209ENST00000560620 C12orf43Q96C57 262 aaKnown RBP10.78□□□□□ -0.68
CTDSPL2-209ENST00000560620 LGALS12Q96DT0 336 aa10.78□□□□□ -0.68
CTDSPL2-209ENST00000560620 C4orf36Q96KX1 117 aa10.78□□□□□ -0.68
CTDSPL2-209ENST00000560620 RDH12Q96NR8 316 aa10.78□□□□□ -0.68
CTDSPL2-209ENST00000560620 JMJD8Q96S16 334 aa10.78□□□□□ -0.68
CTDSPL2-209ENST00000560620 FGF23Q9GZV9 251 aaPredicted RBP10.78□□□□□ -0.68
CTDSPL2-209ENST00000560620 OR51I2Q9H344 312 aa10.78□□□□□ -0.68
CTDSPL2-209ENST00000560620 NLKQ9UBE8 527 aa10.78□□□□□ -0.68
CTDSPL2-209ENST00000560620 SLC7A11Q9UPY5 501 aa10.78□□□□□ -0.68
CTDSPL2-209ENST00000560620 A0A1B0GW55 424 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 LOC107986453A0A1B0GWG9 222 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 ANKRD61A6NGH8 418 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 OR2AT4A6NND4 320 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 DHRS7CA6NNS2 312 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 SLC16A6O15403 523 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 VENTXO95231 258 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 SERPINA3P01011 423 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 DUX4L2P0CJ85 424 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 DUX4L3P0CJ86 424 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 DUX4L4P0CJ87 422 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 DUX4L5P0CJ88 424 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 DUX4L6P0CJ89 424 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 DUX4L7P0CJ90 424 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 ZNF20P17024 532 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 GABRB1P18505 474 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 PAX2Q02962 417 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 CDONQ4KMG0 1287 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 LRRC10Q5BKY1 277 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 METTL11BQ5VVY1 283 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 DUX4L9Q6RFH8 374 aaPredicted RBP10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 RDH10Q8IZV5 341 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 BATF2Q8N1L9 274 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 PRSS35Q8N3Z0 413 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 SPATA3Q8NHX4 192 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 AQP3Q92482 292 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 MED30Q96HR3 178 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 ALG8Q9BVK2 526 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 KAAG1Q9UBP8 84 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 DUX4Q9UBX2 424 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 ZNF69Q9UC07 566 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 EXOGQ9Y2C4 368 aaKnown RBP10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 POLDIP2Q9Y2S7 368 aa10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 RPL36Q9Y3U8 105 aaKnown RBP10.77□□□□□ -0.69
CTDSPL2-209ENST00000560620 E9PQ18 207 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 J3QT63 122 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 TNFRSF13BO14836 293 aaPredicted RBP10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 GATBO75879 557 aaKnown RBP10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 TOX4O94842 621 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 ECDO95905 644 aaPredicted RBP10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 PLATP00750 562 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 FSHBP01225 129 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 TFF1P04155 84 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 LIPFP07098 398 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 CCL1P22362 96 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 PEX2P28328 305 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 KIR3DL2P43630 455 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 IL13RA1P78552 427 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 KLHL22Q53GT1 634 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 KLF17Q5JT82 389 aaPredicted RBP10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 TMEM244Q5VVB8 128 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 STUMQ69YW2 141 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 KRT74Q7RTS7 529 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 FGFRL1Q8N441 504 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 ZNF676Q8N7Q3 588 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 CCDC54Q8NEL0 328 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 OR2G2Q8NGZ5 317 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 ZNF488Q96MN9 340 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 FRRS1LQ9P0K9 344 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 ONECUT1Q9UBC0 465 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 MYRFQ9Y2G1 1151 aa10.76□□□□□ -0.69
CTDSPL2-209ENST00000560620 COL6A5A8TX70 2615 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 PQLC2LA1A4F0 135 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 ZNF879B4DU55 563 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 TRIM77I1YAP6 450 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 J3QRE1 110 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 SYNGR1O43759 233 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 INMTO95050 263 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 NXPH2O95156 264 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 CLIC3O95833 236 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 SFTPBP07988 381 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 PPIAL4GP0DN37 164 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 IGHV4-38-2P0DP08 117 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 SELLP14151 372 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 NDUFB7P17568 137 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 CAPZA1P52907 286 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 HILS1P60008 231 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 ISL1P61371 349 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 ARF6P62330 175 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 ACTG1P63261 375 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 RAB40BQ12829 278 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 GALEQ14376 348 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 SMN1Q16637 294 aaKnown RBP10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 SMIM21Q3B7S5 101 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms