RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 SMC2O95347 1197 aa1.9□□□□□ -2.11
USP8-211ENST00000560527 P01737 135 aa1.9□□□□□ -2.11
USP8-211ENST00000560527 CD28P10747 220 aa1.9□□□□□ -2.11
USP8-211ENST00000560527 RPS11P62280 158 aaKnown RBP eCLIP1.9□□□□□ -2.11
USP8-211ENST00000560527 RBX1P62877 108 aa1.9□□□□□ -2.11
USP8-211ENST00000560527 PAFAH1B2P68402 229 aa1.9□□□□□ -2.11
USP8-211ENST00000560527 FAM53BQ14153 422 aa1.9□□□□□ -2.11
USP8-211ENST00000560527 HHATQ5VTY9 493 aa1.9□□□□□ -2.11
USP8-211ENST00000560527 ZNF680Q8NEM1 530 aa1.9□□□□□ -2.11
USP8-211ENST00000560527 BAALCQ8WXS3 180 aa1.9□□□□□ -2.11
USP8-211ENST00000560527 TMEM159Q96B96 161 aa1.9□□□□□ -2.11
USP8-211ENST00000560527 ZNF707Q96C28 371 aaPredicted RBP1.9□□□□□ -2.11
USP8-211ENST00000560527 TBL1XR1Q9BZK7 514 aa1.9□□□□□ -2.11
USP8-211ENST00000560527 API5Q9BZZ5 524 aaKnown RBP1.9□□□□□ -2.11
USP8-211ENST00000560527 OR2AG1Q9H205 316 aa1.9□□□□□ -2.11
USP8-211ENST00000560527 RPRD1BQ9NQG5 326 aaKnown RBP1.9□□□□□ -2.11
USP8-211ENST00000560527 PRR14LQ5THK1 2151 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 AQRO60306 1485 aaKnown RBP eCLIP1.89□□□□□ -2.114e-6■■■□□ 15.4
USP8-211ENST00000560527 TRAV8-6A0A0B4J262 113 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 GATCO43716 136 aaKnown RBP1.89□□□□□ -2.11
USP8-211ENST00000560527 IGKV1-39P01597 117 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 IGKV1D-39P04432 117 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 TGM4P49221 684 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 BCAP31P51572 246 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 HCCSP53701 268 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 TAS2R60P59551 318 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 NKAIN1Q4KMZ8 207 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 HSP90AA4PQ58FG1 418 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 CPTPQ5TA50 214 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 TBPL2Q6SJ96 375 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 BBS7Q8IWZ6 715 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 OR2M7Q8NG81 312 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 TCP10LQ8TDR4 215 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 Q96MT0 163 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 TSNAXQ99598 290 aaKnown RBP1.89□□□□□ -2.11
USP8-211ENST00000560527 ZNF649Q9BS31 505 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 DHX35Q9H5Z1 703 aaKnown RBP1.89□□□□□ -2.11
USP8-211ENST00000560527 IFNKQ9P0W0 207 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 RWDD2AQ9UIY3 292 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 TFR2Q9UP52 801 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 CFL2Q9Y281 166 aa1.89□□□□□ -2.11
USP8-211ENST00000560527 SDK2Q58EX2 2172 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 IGKV1-6A0A0C4DH72 117 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 A0A0J9YYE9 177 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 A0A1W2PPV4 95 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 H7C2Y5 167 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 TRAPPC6AO75865 159 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 ETHE1O95571 254 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 IGHV1-46P01743 117 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 TRBC1P01850 177 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 IGKV4-1P06312 121 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 PFN1P07737 140 aaKnown RBP1.88□□□□□ -2.11
USP8-211ENST00000560527 OR5AL1P0C617 328 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 OR4Q2P0C623 313 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 SLC35B1P78383 322 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 ADIGQ0VDE8 80 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 WDR43Q15061 677 aaKnown RBP eCLIP1.88□□□□□ -2.11
USP8-211ENST00000560527 TOMM34Q15785 309 aaPredicted RBP1.88□□□□□ -2.11
USP8-211ENST00000560527 ATP6V1FQ16864 119 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 LINC00303Q3SY05 128 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 ZNF678Q5SXM1 525 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 THOC7Q6I9Y2 204 aaKnown RBP1.88□□□□□ -2.11
USP8-211ENST00000560527 TMEM136Q6ZRR5 245 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 FBXO36Q8NEA4 188 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 ORAOV1Q8WV07 137 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 YIPF5Q969M3 257 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 TOP1MTQ969P6 601 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 GABRG3Q99928 467 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 MS4A8Q9BY19 250 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 C6orf50Q9HD87 102 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 LZTFL1Q9NQ48 299 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 ZMAT5Q9UDW3 170 aaKnown RBP1.88□□□□□ -2.11
USP8-211ENST00000560527 RAB22AQ9UL26 194 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 SLC7A11Q9UPY5 501 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 PPIL1Q9Y3C6 166 aa1.88□□□□□ -2.11
USP8-211ENST00000560527 LOC102724200A0A096LPH7 203 aaPredicted RBP1.87□□□□□ -2.11
USP8-211ENST00000560527 IGKV2-24A0A0C4DH68 120 aa1.87□□□□□ -2.11
USP8-211ENST00000560527 A0A0G2JMP0 313 aa1.87□□□□□ -2.11
USP8-211ENST00000560527 A0A0X1KG70 313 aa1.87□□□□□ -2.11
USP8-211ENST00000560527 J3QT63 122 aa1.87□□□□□ -2.11
USP8-211ENST00000560527 PLEKHA8P1O95397 391 aa1.87□□□□□ -2.11
USP8-211ENST00000560527 FSTL3O95633 263 aa1.87□□□□□ -2.11
USP8-211ENST00000560527 CRYGCP07315 174 aa1.87□□□□□ -2.11
USP8-211ENST00000560527 HOXB8P17481 243 aaPredicted RBP1.87□□□□□ -2.11
USP8-211ENST00000560527 HLA-DMAP28067 261 aa1.87□□□□□ -2.11
USP8-211ENST00000560527 GNRHRP30968 328 aa1.87□□□□□ -2.11
USP8-211ENST00000560527 PSMB2P49721 201 aa1.87□□□□□ -2.11
USP8-211ENST00000560527 MLF1P58340 268 aa1.87□□□□□ -2.11
USP8-211ENST00000560527 GRB2P62993 217 aaKnown RBP1.87□□□□□ -2.11
USP8-211ENST00000560527 MEF2CQ06413 473 aaPredicted RBP1.87□□□□□ -2.11
USP8-211ENST00000560527 ZNF235Q14590 738 aa1.87□□□□□ -2.11
USP8-211ENST00000560527 CDNFQ49AH0 187 aa1.87□□□□□ -2.11
USP8-211ENST00000560527 TMEM69Q5SWH9 247 aa1.87□□□□□ -2.11
USP8-211ENST00000560527 MRPL2Q5T653 305 aaKnown RBP1.87□□□□□ -2.11
USP8-211ENST00000560527 APOBEC3HQ6NTF7 200 aaKnown RBP1.87□□□□□ -2.11
USP8-211ENST00000560527 ZCCHC24Q8N2G6 241 aaKnown RBP1.87□□□□□ -2.11
USP8-211ENST00000560527 CYB561A3Q8NBI2 242 aa1.87□□□□□ -2.11
USP8-211ENST00000560527 ING5Q8WYH8 240 aa1.87□□□□□ -2.11
USP8-211ENST00000560527 TFGQ92734 400 aaPredicted RBP1.87□□□□□ -2.11
USP8-211ENST00000560527 ZBED3Q96IU2 234 aaPredicted RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms