RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ZMYND19Q96E35 227 aaPredicted RBP2.5□□□□□ -2.01
SPG11-218ENST00000559754 YIPF6Q96EC8 236 aa2.5□□□□□ -2.01
SPG11-218ENST00000559754 SLC25A2Q9BXI2 301 aa2.5□□□□□ -2.01
SPG11-218ENST00000559754 API5Q9BZZ5 524 aaKnown RBP2.5□□□□□ -2.01
SPG11-218ENST00000559754 TMEM27Q9HBJ8 222 aa2.5□□□□□ -2.01
SPG11-218ENST00000559754 C12orf4Q9NQ89 552 aa2.5□□□□□ -2.01
SPG11-218ENST00000559754 DDIT4Q9NX09 232 aa2.5□□□□□ -2.01
SPG11-218ENST00000559754 ZNF226Q9NYT6 803 aa2.5□□□□□ -2.01
SPG11-218ENST00000559754 TMEM9Q9P0T7 183 aa2.5□□□□□ -2.01
SPG11-218ENST00000559754 CD84Q9UIB8 345 aa2.5□□□□□ -2.01
SPG11-218ENST00000559754 ANXA10Q9UJ72 324 aa2.5□□□□□ -2.01
SPG11-218ENST00000559754 PSG8Q9UQ74 426 aa2.5□□□□□ -2.01
SPG11-218ENST00000559754 ZNFX1Q9P2E3 1918 aaKnown RBP2.5□□□□□ -2.01
SPG11-218ENST00000559754 PDS5BQ9NTI5 1447 aa2.5□□□□□ -2.01
SPG11-218ENST00000559754 TNRQ92752 1358 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 ZNF608Q9ULD9 1512 aaPredicted RBP2.49□□□□□ -2.01
SPG11-218ENST00000559754 IGHV1-69DA0A0B4J2H0 117 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 CIB4A0PJX0 185 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 GOLGA6L19H0YKK7 550 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 J3QT63 122 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 TNFSF13O75888 250 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 MMP23AO75900 390 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 SUPT7LO94864 414 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 FABP3P05413 133 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 COX5BP10606 129 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 CRISP2P16562 243 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 PVALBP20472 110 aaPredicted RBP2.49□□□□□ -2.01
SPG11-218ENST00000559754 FUT3P21217 361 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 OMGP23515 440 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 CYB561P49447 251 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 NDUFA8P51970 172 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 CEBPGP53567 150 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 KRTAP10-1P60331 282 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 MGAT3Q09327 533 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 IMPG1Q17R60 797 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 TTC32Q5I0X7 151 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 METTL21CQ5VZV1 264 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 MED27Q6P2C8 311 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 ARL9Q6T311 187 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 USP50Q70EL3 339 aaPredicted RBP2.49□□□□□ -2.01
SPG11-218ENST00000559754 CAMK2N1Q7Z7J9 78 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 LGI3Q8N145 548 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 C2orf73Q8N5S3 287 aaPredicted RBP2.49□□□□□ -2.01
SPG11-218ENST00000559754 C19orf18Q8NEA5 215 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 OR10G6Q8NH81 332 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 OR1S1Q8NH92 325 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 FAM45AQ8TCE6 357 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 NELFBQ8WX92 580 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 ESR2Q92731 530 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 MARC2Q969Z3 335 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 TMEM101Q96IK0 257 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 Q96MT0 163 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 RILPQ96NA2 401 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 WFIKKN1Q96NZ8 548 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 EMC6Q9BV81 110 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 SLC25A39Q9BZJ4 359 aaPredicted RBP2.49□□□□□ -2.01
SPG11-218ENST00000559754 LHX5Q9H2C1 402 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 EDA2RQ9HAV5 297 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 DIABLOQ9NR28 239 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 DNAJC27Q9NZQ0 273 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 RAB22AQ9UL26 194 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 NDRG2Q9UN36 371 aaKnown RBP2.49□□□□□ -2.01
SPG11-218ENST00000559754 PRG3Q9Y2Y8 225 aaPredicted RBP2.49□□□□□ -2.01
SPG11-218ENST00000559754 TBL2Q9Y4P3 447 aaKnown RBP2.49□□□□□ -2.01
SPG11-218ENST00000559754 POLR3HQ9Y535 204 aaPredicted RBP2.49□□□□□ -2.01
SPG11-218ENST00000559754 RAB3GAP2Q9H2M9 1393 aa2.49□□□□□ -2.01
SPG11-218ENST00000559754 TET2Q6N021 2002 aaPredicted RBP2.48□□□□□ -2.01
SPG11-218ENST00000559754 EPOPA6NHQ4 379 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 GJE1A6NN92 205 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 CENPBD1B2RD01 187 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 PSPHP1O15172 72 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 TRAPPC3O43617 180 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 SULT1B1O43704 296 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 RBBP9O75884 186 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 RPP14O95059 124 aaKnown RBP2.48□□□□□ -2.01
SPG11-218ENST00000559754 SLC25A27O95847 323 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 MOSP00540 346 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 APOEP02649 317 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 TCN2P20062 427 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 PAX6P26367 422 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 CD70P32970 193 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 TTPAP49638 278 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 ERFP50548 548 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 DLX6P56179 175 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 WNT4P56705 351 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 RPL10AP62906 217 aaKnown RBP2.48□□□□□ -2.01
SPG11-218ENST00000559754 BASP1P80723 227 aaKnown RBP2.48□□□□□ -2.01
SPG11-218ENST00000559754 BAXQ07812 192 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 INCA1Q0VD86 236 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 STX5Q13190 355 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 PRSS8Q16651 343 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 CEACAM16Q2WEN9 425 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 PDZD11Q5EBL8 140 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 TCEAL5Q5H9L2 206 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 HHATQ5VTY9 493 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 PLET1Q6UQ28 207 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 ENTHD1Q8IYW4 607 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 GPR26Q8NDV2 337 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 OR6N1Q8NGY5 312 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 CDC26Q8NHZ8 85 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms