RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 YIPF5Q969M3 257 aa14.17□□□□□ -0.14
TPM1-219ENST00000559397 RFT1Q96AA3 541 aa14.17□□□□□ -0.14
TPM1-219ENST00000559397 FAIMQ9NVQ4 179 aa14.17□□□□□ -0.14
TPM1-219ENST00000559397 MRPS7Q9Y2R9 242 aaKnown RBP14.17□□□□□ -0.14
TPM1-219ENST00000559397 SPEF1Q9Y4P9 236 aa14.17□□□□□ -0.14
TPM1-219ENST00000559397 ABCA4P78363 2273 aa14.16□□□□□ -0.14
TPM1-219ENST00000559397 A0A1W2PPR1 153 aa14.16□□□□□ -0.14
TPM1-219ENST00000559397 HCKP08631 526 aa14.16□□□□□ -0.14
TPM1-219ENST00000559397 SPNP16150 400 aa14.16□□□□□ -0.14
TPM1-219ENST00000559397 TAS2R20P59543 309 aa14.16□□□□□ -0.14
TPM1-219ENST00000559397 ERVS71-1P61550 626 aa14.16□□□□□ -0.14
TPM1-219ENST00000559397 UNQ6126/PRO20091Q6UXV3 157 aa14.16□□□□□ -0.14
TPM1-219ENST00000559397 DNM1P46Q6ZS02 220 aa14.16□□□□□ -0.14
TPM1-219ENST00000559397 SPSB1Q96BD6 273 aa14.16□□□□□ -0.14
TPM1-219ENST00000559397 C1orf147Q96MC9 270 aaPredicted RBP14.16□□□□□ -0.14
TPM1-219ENST00000559397 C11orf54Q9H0W9 315 aaPredicted RBP14.16□□□□□ -0.14
TPM1-219ENST00000559397 ATP23Q9Y6H3 246 aa14.16□□□□□ -0.14
TPM1-219ENST00000559397 CRYBG3Q68DQ2 2970 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 GGT3PA6NGU5 568 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 E7EQL1 145 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 GMDSO60547 372 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 ALDH3B1P43353 468 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 PPP1CBP62140 327 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 MRPS10P82664 201 aaKnown RBP14.15□□□□□ -0.14
TPM1-219ENST00000559397 DGCR2P98153 550 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 GK2Q14410 553 aaPredicted RBP14.15□□□□□ -0.14
TPM1-219ENST00000559397 KISS1Q15726 138 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 MSMPQ1L6U9 139 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 CLVS2Q5SYC1 327 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 ANGPTL5Q86XS5 388 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 C1orf174Q8IYL3 243 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 ZNF295-AS1Q8N0V1 137 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 SLC25A40Q8TBP6 338 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 TMEM171Q8WVE6 324 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 SPACA5Q96QH8 159 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 DIABLOQ9NR28 239 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 RAB22AQ9UL26 194 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 PLCE1Q9P212 2302 aa14.15□□□□□ -0.14
TPM1-219ENST00000559397 A0A0A6YYH2 397 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 A6NJ64 397 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 TMEM14DPA8MWL7 114 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 GABARAPH6UMI1 98 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 VSIG8P0DPA2 414 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 TUBG1P23258 451 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 MALLQ13021 153 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 ZNF672Q499Z4 452 aaPredicted RBP14.14□□□□□ -0.15
TPM1-219ENST00000559397 SPATA46Q5T0L3 261 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 OR5L1Q8NGL2 311 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 UBASH3BQ8TF42 649 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 MARS2Q96GW9 593 aaKnown RBP14.14□□□□□ -0.15
TPM1-219ENST00000559397 OR2J1Q9GZK6 312 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 OPA3Q9H6K4 179 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 ZNF442Q9H7R0 627 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 TUBG2Q9NRH3 451 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 GPR173Q9NS66 373 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 CA10Q9NS85 328 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 PTTG3PQ9NZH4 202 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 MRPS28Q9Y2Q9 187 aaKnown RBP14.14□□□□□ -0.15
TPM1-219ENST00000559397 hCG_2014768A0A024R1R8 64 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 ZNF816-ZNF321PA0A0X1KG74 233 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 LINC00854A0A1B0GVQ3 168 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 SSX4O60224 188 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 KDM4BO94953 1096 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 UBBP0CG47 229 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 NAT2P11245 290 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 PRKACBP22694 351 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 OR3A4PP47883 348 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 PRSS12P56730 875 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 UNC119Q13432 240 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 AWAT2Q6E213 333 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 OR10K2Q6IF99 312 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 VHLLQ6RSH7 139 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 CCBE1Q6UXH8 406 aaPredicted RBP14.14□□□□□ -0.15
TPM1-219ENST00000559397 OR2W3Q7Z3T1 314 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 NRARPQ7Z6K4 114 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 ITPKCQ96DU7 683 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 SLC22A4Q9H015 551 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 ATG5Q9H1Y0 275 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 GHRLQ9UBU3 117 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 POU2F3Q9UKI9 436 aa14.14□□□□□ -0.15
TPM1-219ENST00000559397 RBMX2Q9Y388 322 aaKnown RBP14.14□□□□□ -0.15
TPM1-219ENST00000559397 NRASP01111 189 aa14.13□□□□□ -0.15
TPM1-219ENST00000559397 CD3GP09693 182 aa14.13□□□□□ -0.15
TPM1-219ENST00000559397 ZNF250P15622 560 aa14.13□□□□□ -0.15
TPM1-219ENST00000559397 PTGFRP43088 359 aa14.13□□□□□ -0.15
TPM1-219ENST00000559397 HLXQ14774 488 aaPredicted RBP14.13□□□□□ -0.15
TPM1-219ENST00000559397 CNN3Q15417 329 aaKnown RBP14.13□□□□□ -0.15
TPM1-219ENST00000559397 TMEM255AQ5JRV8 349 aa14.13□□□□□ -0.15
TPM1-219ENST00000559397 RGS7BPQ6MZT1 257 aaPredicted RBP14.13□□□□□ -0.15
TPM1-219ENST00000559397 GLIPR1L1Q6UWM5 242 aa14.13□□□□□ -0.15
TPM1-219ENST00000559397 FBXW12Q6X9E4 464 aa14.13□□□□□ -0.15
TPM1-219ENST00000559397 KLF14Q8TD94 323 aaPredicted RBP14.13□□□□□ -0.15
TPM1-219ENST00000559397 PIGTQ969N2 578 aa14.13□□□□□ -0.15
TPM1-219ENST00000559397 TECTBQ96PL2 329 aa14.13□□□□□ -0.15
TPM1-219ENST00000559397 NEK6Q9HC98 313 aa14.13□□□□□ -0.15
TPM1-219ENST00000559397 CISD1Q9NZ45 108 aaKnown RBP14.13□□□□□ -0.15
TPM1-219ENST00000559397 ROS1P08922 2347 aa14.13□□□□□ -0.15
TPM1-219ENST00000559397 MPV17P39210 176 aa14.12□□□□□ -0.15
TPM1-219ENST00000559397 INPP1P49441 399 aa14.12□□□□□ -0.15
TPM1-219ENST00000559397 RPS23P62266 143 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms