RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 NUDCD2Q8WVJ2 157 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 DVL3Q92997 716 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-207ENST00000558763 TM2D1Q9BX74 207 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 SELENOIQ9C0D9 397 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 RALYQ9UKM9 306 aaKnown RBP11.16□□□□□ -0.62
SMAD3-207ENST00000558763 STARD10Q9Y365 291 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 MFNGO00587 321 aa11.15□□□□□ -0.62
SMAD3-207ENST00000558763 CRTAPO75718 401 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-207ENST00000558763 RAD51DO75771 328 aa11.15□□□□□ -0.62
SMAD3-207ENST00000558763 NDUFB6O95139 128 aa11.15□□□□□ -0.62
SMAD3-207ENST00000558763 IL2RAP01589 272 aa11.15□□□□□ -0.62
SMAD3-207ENST00000558763 CD74P04233 296 aa11.15□□□□□ -0.62
SMAD3-207ENST00000558763 SERPINA5P05154 406 aa11.15□□□□□ -0.62
SMAD3-207ENST00000558763 CHRM2P08172 466 aa11.15□□□□□ -0.62
SMAD3-207ENST00000558763 HOXD4P09016 255 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-207ENST00000558763 MGMTP16455 207 aa11.15□□□□□ -0.62
SMAD3-207ENST00000558763 CASP6P55212 293 aa11.15□□□□□ -0.62
SMAD3-207ENST00000558763 MTCP1P56278 107 aa11.15□□□□□ -0.62
SMAD3-207ENST00000558763 RRAS2P62070 204 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-207ENST00000558763 HLXQ14774 488 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-207ENST00000558763 CNN3Q15417 329 aaKnown RBP11.15□□□□□ -0.62
SMAD3-207ENST00000558763 FJX1Q86VR8 437 aa11.15□□□□□ -0.62
SMAD3-207ENST00000558763 TMEM229BQ8NBD8 167 aa11.15□□□□□ -0.62
SMAD3-207ENST00000558763 ZNF107Q9UII5 783 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-207ENST00000558763 POU2F3Q9UKI9 436 aa11.15□□□□□ -0.62
SMAD3-207ENST00000558763 ANAPC10Q9UM13 185 aa11.15□□□□□ -0.62
SMAD3-207ENST00000558763 ESPL1Q14674 2120 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 POLEQ07864 2286 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 IGKV1-12A0A0C4DH73 117 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 ICMTO60725 284 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 C1QL1O75973 258 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 IGKV1D-12P01611 117 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 ZNF735P0CB33 412 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 AKAIN1P0CW23 69 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 GTF2F2P13984 249 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 HIST1H1DP16402 221 aaKnown RBP11.14□□□□□ -0.63
SMAD3-207ENST00000558763 PRKACBP22694 351 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 MECP2P51608 486 aaKnown RBP11.14□□□□□ -0.63
SMAD3-207ENST00000558763 TSC22D1Q15714 1073 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 STEAP1BQ6NZ63 245 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 ZNF843Q8N446 348 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 GIMAP1Q8WWP7 306 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 HPSE2Q8WWQ2 592 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 NANOS1Q8WY41 292 aaKnown RBP11.14□□□□□ -0.63
SMAD3-207ENST00000558763 STARD4Q96DR4 205 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 FYTTD1Q96QD9 318 aaKnown RBP11.14□□□□□ -0.63
SMAD3-207ENST00000558763 CST11Q9H112 138 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 RANGRFQ9HD47 186 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-207ENST00000558763 PLSCR4Q9NRQ2 329 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 MCUBQ9NWR8 336 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 GPR160Q9UJ42 338 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 A0A1W2PR80 420 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 B8ZZF3 427 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 ANGPTL7O43827 346 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 PEX14O75381 377 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 SERPINA2P20848 420 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 TIMP3P35625 211 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 CA7P43166 264 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 UQCRFS1P47985 274 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 RBP2P50120 134 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 PLP2Q04941 152 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 DAZAP2Q15038 168 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-207ENST00000558763 LHFPL2Q6ZUX7 228 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 PIAS4Q8N2W9 510 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-207ENST00000558763 GVQW1Q8N7I0 195 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 CHST4Q8NCG5 386 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 SLC30A7Q8NEW0 376 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 ARHGAP5-AS1Q96IT6 56 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 Q96M66 194 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 BEX2Q9BXY8 128 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMAD3-207ENST00000558763 KCNN3Q9UGI6 736 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 ZNF221Q9UK13 617 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 ING4Q9UNL4 249 aa11.14□□□□□ -0.63
SMAD3-207ENST00000558763 ZNF462Q96JM2 2506 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 FAM230AA0A1W2PPH8 454 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 ARPC1BO15143 372 aaKnown RBP11.13□□□□□ -0.63
SMAD3-207ENST00000558763 SPRY1O43609 319 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-207ENST00000558763 LILRA1O75019 489 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 DHFRP00374 187 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 HPXP02790 462 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 GSTP1P09211 210 aaKnown RBP11.13□□□□□ -0.63
SMAD3-207ENST00000558763 APLNRP35414 380 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 NKX2-5P52952 324 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-207ENST00000558763 TAS2R19P59542 299 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 TGFBR3Q03167 851 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 EIF2S3LQ2VIR3 472 aaKnown RBP11.13□□□□□ -0.63
SMAD3-207ENST00000558763 SEZ6L2Q6UXD5 910 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 TRAPPC6BQ86SZ2 158 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 CALHM1Q8IU99 346 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 WDR31Q8NA23 367 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 OR4S1Q8NGB4 309 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 OR56B1Q8NGI3 324 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 OR51S1Q8NGJ8 323 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 ST8SIA4Q92187 359 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 RAB3CQ96E17 227 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 BORCS8Q96FH0 119 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 TINAGL1Q9GZM7 467 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-207ENST00000558763 ACTR6Q9GZN1 396 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 OR10A4Q9H209 315 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms