RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 PPP1R1AQ13522 171 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 AANATQ16613 207 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 NKPD1Q17RQ9 610 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 MICBQ29980 383 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 RSPO1Q2MKA7 263 aaPredicted RBP7.27□□□□□ -1.25
SPG11-209ENST00000558253 CHRFAM7AQ494W8 412 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 SLC22A6Q4U2R8 563 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 PLAC9Q5JTB6 97 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 PHYHD1Q5SRE7 291 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 ABHD17BQ5VST6 288 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 DCAF12L2Q5VW00 463 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 CDCP2Q5VXM1 449 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 TMEM42Q69YG0 159 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 RGS7BPQ6MZT1 257 aaPredicted RBP7.27□□□□□ -1.25
SPG11-209ENST00000558253 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.27□□□□□ -1.25
SPG11-209ENST00000558253 LHFPL1Q86WI0 220 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 CCDC36Q8IYA8 594 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 TMEM104Q8NE00 496 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 PXT1Q8NFP0 134 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 OR4S1Q8NGB4 309 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 OR2I1PQ8NGU4 316 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 NUDCD2Q8WVJ2 157 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 RBPMSQ93062 196 aaKnown RBP7.27□□□□□ -1.25
SPG11-209ENST00000558253 RELTQ969Z4 430 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 FBXO17Q96EF6 278 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 FOXB1Q99853 325 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 SRXN1Q9BYN0 137 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 PRDM14Q9GZV8 571 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 IFT22Q9H7X7 185 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 ZMAT3Q9HA38 289 aaKnown RBP7.27□□□□□ -1.25
SPG11-209ENST00000558253 ZFP57Q9NU63 452 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 RDH8Q9NYR8 311 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 MYEF2Q9P2K5 600 aaKnown RBP7.27□□□□□ -1.25
SPG11-209ENST00000558253 TNFSF18Q9UNG2 199 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 ZNF175Q9Y473 711 aa7.27□□□□□ -1.25
SPG11-209ENST00000558253 CDH23Q9H251 3354 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 TRAV14DV4A0A0A6YYC5 116 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 A0A0A6YYD4 124 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 OR5H15A6NDH6 313 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 FAM90A10PA6NDY2 464 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 FAM90A18PA6NE21 464 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 FAM90A16PA6NEW6 464 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 FAM90A20PA6NIJ5 464 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 FAM90A8PA6NJQ4 464 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 FAM90A7PA6NKC0 464 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 ZNF724A8MTY0 619 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 FAM90A22PA8MWA6 464 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 FAM90A12PA8MX19 464 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 FAM90A5PA8MXJ8 464 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 FAM90A23PA8MXZ1 464 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 ATP6V1G2-DDX39BF2Z307 99 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 SOCS1O15524 211 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 BCL2L11O43521 198 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 TRAPPC6AO75865 159 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 SYNGR4O95473 234 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 SIX6O95475 246 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 CFDP00746 253 aaPredicted RBP7.26□□□□□ -1.25
SPG11-209ENST00000558253 PMP2P02689 132 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 CSTBP04080 98 aaKnown RBP7.26□□□□□ -1.25
SPG11-209ENST00000558253 SERPINA5P05154 406 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 FAM90A15PP0C7V4 464 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 FAM90A13PP0C7W8 464 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 FAM90A14PP0C7W9 464 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 FAM90A24PP0C7X0 464 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 TMEM225BP0DP42 221 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 FOSL1P15407 271 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 GDF1P27539 372 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 ATP1B3P54709 279 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 SNU13P55769 128 aaKnown RBP7.26□□□□□ -1.25
SPG11-209ENST00000558253 OC90Q02509 493 aaPredicted RBP7.26□□□□□ -1.25
SPG11-209ENST00000558253 Q0VFX4 171 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 AIMP2Q13155 320 aaKnown RBP7.26□□□□□ -1.25
SPG11-209ENST00000558253 RSU1Q15404 277 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 UBE2V2Q15819 145 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 SRSF7Q16629 238 aaKnown RBP eCLIP7.26□□□□□ -1.25
SPG11-209ENST00000558253 HYAL4Q2M3T9 481 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 C2orf68Q2NKX9 166 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 OVCH2Q7RTZ1 564 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 GALNTL5Q7Z4T8 443 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 HSD17B13Q7Z5P4 300 aaPredicted RBP7.26□□□□□ -1.25
SPG11-209ENST00000558253 SAXO1Q8IYX7 474 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 LRRC18Q8N456 261 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 GVQW1Q8N7I0 195 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 CSNK2A3Q8NEV1 391 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 OR10D3Q8NH80 312 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 PIGTQ969N2 578 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 SPSB4Q96A44 273 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 CMBLQ96DG6 245 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 WDR89Q96FK6 387 aaPredicted RBP7.26□□□□□ -1.25
SPG11-209ENST00000558253 REEP6Q96HR9 211 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 ARHGAP5-AS1Q96IT6 56 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 Q96M66 194 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 FER1L6-AS2Q96M78 137 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 PECRQ9BY49 303 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 OR2H1Q9GZK4 316 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 CRLF2Q9HC73 371 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 GPR35Q9HC97 309 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 GP6Q9HCN6 339 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 DECR2Q9NUI1 292 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 PLEKHJ1Q9NW61 149 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms