RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 RYR3Q15413 4870 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 IGKV1D-17A0A075B6S4 117 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 A0A1W2PRQ8 180 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 OR6C68A6NDL8 312 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 ZNF850A8MQ14 1090 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 C17orf98A8MV24 154 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 FAM90A22PA8MWA6 464 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 FAM220BPB1ANY3 271 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 SLC1A7O00341 560 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 ZNF593O00488 134 aaPredicted RBP4.14□□□□□ -1.75
SPG11-208ENST00000558155 E2F6O75461 281 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 TFF1P04155 84 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 LPLP06858 475 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 H1F0P07305 194 aaKnown RBP4.14□□□□□ -1.75
SPG11-208ENST00000558155 ANXA2P07355 339 aaKnown RBP4.14□□□□□ -1.75
SPG11-208ENST00000558155 SLC2A1P11166 492 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 HIST1H1CP16403 213 aaKnown RBP4.14□□□□□ -1.75
SPG11-208ENST00000558155 CHATP28329 748 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 HSD11B1P28845 292 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 SLC6A1P30531 599 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 BRS3P32247 399 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 OMPP47874 163 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 CEBPDP49716 269 aaPredicted RBP4.14□□□□□ -1.75
SPG11-208ENST00000558155 THBS3P49746 956 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 MAGOHP61326 146 aaKnown RBP4.14□□□□□ -1.75
SPG11-208ENST00000558155 GRB2P62993 217 aaKnown RBP4.14□□□□□ -1.75
SPG11-208ENST00000558155 SLC34A1Q06495 639 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 PRDX4Q13162 271 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 DYNC1I2Q13409 638 aaKnown RBP4.14□□□□□ -1.75
SPG11-208ENST00000558155 DGCR6Q14129 220 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 MINOS1Q5TGZ0 78 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 ZNF770Q6IQ21 691 aaPredicted RBP4.14□□□□□ -1.75
SPG11-208ENST00000558155 ZNF782Q6ZMW2 699 aaPredicted RBP4.14□□□□□ -1.75
SPG11-208ENST00000558155 DCXRQ7Z4W1 244 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 THAP5Q7Z6K1 395 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 VTCN1Q7Z7D3 282 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 ZNF561Q8N587 486 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 FAM86B1Q8N7N1 296 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 OR2T12Q8NG77 320 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 OR11H6Q8NGC7 330 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 OR4M1Q8NGD0 313 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 OR2T4Q8NH00 348 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 SVIPQ8NHG7 77 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 OR5P3Q8WZ94 311 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 PIGCQ92535 297 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 SLAMF6Q96DU3 332 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 IFT27Q9BW83 186 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 KRTAP17-1Q9BYP8 105 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 OR10A2Q9H208 303 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 RGCCQ9H4X1 137 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 ZFP57Q9NU63 452 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 GID8Q9NWU2 228 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 ETAA1Q9NY74 926 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 VNN3Q9NY84 501 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 MINOS1-NBL1R4GNA1 71 aa4.14□□□□□ -1.75
SPG11-208ENST00000558155 hCG_38984A0A1B0GV85 526 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 PSMB11A5LHX3 300 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 TVP23AA6NH52 213 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 A6NJY4 79 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 RFPL4AA6NLU0 287 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 NUDT19A8MXV4 375 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 ODF3BA8MYP8 253 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 ZNF878C9JN71 531 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 RFPL4AL1F8VTS6 287 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 GSTA4O15217 222 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 SLC22A2O15244 555 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 MTRF1O75570 445 aaKnown RBP4.13□□□□□ -1.75
SPG11-208ENST00000558155 ZNF682O95780 498 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 CST4P01036 141 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 RBP4P02753 201 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 SPARCP09486 303 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 CCL3L1P16619 93 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 RHCEP18577 417 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 FMO3P31513 532 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 PRDX2P32119 198 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 DCTDP32321 178 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 PYCR1P32322 319 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 ECI1P42126 302 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 RPS27P42677 84 aaKnown RBP4.13□□□□□ -1.75
SPG11-208ENST00000558155 CX3CR1P49238 355 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 ENTPD1P49961 510 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 ARHGDIBP52566 201 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 SMIM11AP58511 58 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 FXYD6P3P58550 94 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 CBX1P83916 185 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.13□□□□□ -1.75
SPG11-208ENST00000558155 IL18R1Q13478 541 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 KRT72Q14CN4 511 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 SEC23BQ15437 767 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 ABCA11PQ4W5N1 156 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 COQ5Q5HYK3 327 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 FGD3Q5JSP0 725 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 C9orf152Q5JTZ5 239 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 TEX30Q5JUR7 227 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 SLC35F1Q5T1Q4 408 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 C9orf66Q5T8R8 295 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 METTL21CQ5VZV1 264 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 ZNF626Q68DY1 528 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 LCN8Q6JVE9 175 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms