RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 ZNF404Q494X3 552 aa14.05□□□□□ -0.16
PBX4-202ENST00000557978 DMRTC1Q5HYR2 192 aa14.05□□□□□ -0.16
PBX4-202ENST00000557978 UTS2BQ765I0 119 aa14.05□□□□□ -0.16
PBX4-202ENST00000557978 SERPINA12Q8IW75 414 aa14.05□□□□□ -0.16
PBX4-202ENST00000557978 BOLLQ8N9W6 283 aaKnown RBP14.05□□□□□ -0.16
PBX4-202ENST00000557978 LINC01356Q8N9X3 169 aa14.05□□□□□ -0.16
PBX4-202ENST00000557978 OR10AC1Q8NH08 325 aa14.05□□□□□ -0.16
PBX4-202ENST00000557978 TSEN15Q8WW01 171 aaKnown RBP14.05□□□□□ -0.16
PBX4-202ENST00000557978 MSI2Q96DH6 328 aaKnown RBP14.05□□□□□ -0.16
PBX4-202ENST00000557978 ADAT3Q96EY9 351 aaPredicted RBP14.05□□□□□ -0.16
PBX4-202ENST00000557978 BORCS8Q96FH0 119 aa14.05□□□□□ -0.16
PBX4-202ENST00000557978 CCDC90BQ9GZT6 254 aa14.05□□□□□ -0.16
PBX4-202ENST00000557978 FGF23Q9GZV9 251 aaPredicted RBP14.05□□□□□ -0.16
PBX4-202ENST00000557978 PATZ1Q9HBE1 687 aaKnown RBP14.05□□□□□ -0.16
PBX4-202ENST00000557978 ZNF281Q9Y2X9 895 aa14.05□□□□□ -0.16
PBX4-202ENST00000557978 LGALS8O00214 317 aa14.04□□□□□ -0.16
PBX4-202ENST00000557978 NDUFA2O43678 99 aa14.04□□□□□ -0.16
PBX4-202ENST00000557978 ZNF205O95201 554 aa14.04□□□□□ -0.16
PBX4-202ENST00000557978 OCM2P0CE71 109 aa14.04□□□□□ -0.16
PBX4-202ENST00000557978 OCMP0CE72 109 aaPredicted RBP14.04□□□□□ -0.16
PBX4-202ENST00000557978 RBMXP38159 391 aaKnown RBP14.04□□□□□ -0.16
PBX4-202ENST00000557978 HAAOP46952 286 aa14.04□□□□□ -0.16
PBX4-202ENST00000557978 KRTAP1-1Q07627 177 aa14.04□□□□□ -0.16
PBX4-202ENST00000557978 ACSM1Q08AH1 577 aa14.04□□□□□ -0.16
PBX4-202ENST00000557978 FAM201AQ5SY85 155 aa14.04□□□□□ -0.16
PBX4-202ENST00000557978 DMKNQ6E0U4 476 aaPredicted RBP14.04□□□□□ -0.16
PBX4-202ENST00000557978 PRSS48Q7RTY5 328 aa14.04□□□□□ -0.16
PBX4-202ENST00000557978 DNAAF1Q8NEP3 725 aa14.04□□□□□ -0.16
PBX4-202ENST00000557978 OR5D14Q8NGL3 314 aa14.04□□□□□ -0.16
PBX4-202ENST00000557978 YTHDF1Q9BYJ9 559 aaKnown RBP14.04□□□□□ -0.16
PBX4-202ENST00000557978 MIOXQ9UGB7 285 aa14.04□□□□□ -0.16
PBX4-202ENST00000557978 FAM230AA0A1W2PPH8 454 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 PQLC2LA1A4F0 135 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 OOEPA6NGQ2 149 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 SRRM5B3KS81 715 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 PLPP2O43688 288 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 TGFAP01135 160 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 CD1AP06126 327 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 MUC1P15941 1255 aaPredicted RBP14.03□□□□□ -0.16
PBX4-202ENST00000557978 PRKACBP22694 351 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 RBP2P50120 134 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 ATP1B3P54709 279 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 IRF3Q14653 427 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 SPHARQ15513 63 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 MICBQ29980 383 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 YIF1BQ5BJH7 314 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 SFRP4Q6FHJ7 346 aaPredicted RBP14.03□□□□□ -0.16
PBX4-202ENST00000557978 FAM166AQ6J272 317 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 HAGHLQ6PII5 290 aaPredicted RBP14.03□□□□□ -0.16
PBX4-202ENST00000557978 DCDC5Q6ZRR9 648 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 PARP16Q8N5Y8 322 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 TRMT10AQ8TBZ6 339 aaKnown RBP14.03□□□□□ -0.16
PBX4-202ENST00000557978 GHSRQ92847 366 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 TMEM246Q9BRR3 403 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 ZCCHC4Q9H5U6 513 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 METTL17Q9H7H0 456 aaPredicted RBP14.03□□□□□ -0.16
PBX4-202ENST00000557978 POLDIP2Q9Y2S7 368 aa14.03□□□□□ -0.16
PBX4-202ENST00000557978 SIRT4Q9Y6E7 314 aaPredicted RBP14.03□□□□□ -0.16
PBX4-202ENST00000557978 CEACAM18A8MTB9 384 aa14.02□□□□□ -0.16
PBX4-202ENST00000557978 FAM157AC9JC47 383 aa14.02□□□□□ -0.16
PBX4-202ENST00000557978 C3orf80F5H4A9 247 aa14.02□□□□□ -0.16
PBX4-202ENST00000557978 ALX3O95076 343 aa14.02□□□□□ -0.16
PBX4-202ENST00000557978 MT-ND2P03891 347 aa14.02□□□□□ -0.16
PBX4-202ENST00000557978 ZNF16P17020 682 aaPredicted RBP14.02□□□□□ -0.16
PBX4-202ENST00000557978 ATF1P18846 271 aa14.02□□□□□ -0.16
PBX4-202ENST00000557978 CELP19835 753 aa14.02□□□□□ -0.16
PBX4-202ENST00000557978 GABARAPL2P60520 117 aa14.02□□□□□ -0.16
PBX4-202ENST00000557978 MED22Q15528 200 aa14.02□□□□□ -0.16
PBX4-202ENST00000557978 TEX36Q5VZQ5 186 aa14.02□□□□□ -0.16
PBX4-202ENST00000557978 NLRC3Q7RTR2 1065 aa14.02□□□□□ -0.16
PBX4-202ENST00000557978 DEFB108BQ8NET1 73 aa14.02□□□□□ -0.16
PBX4-202ENST00000557978 OR51F2Q8NH61 342 aa14.02□□□□□ -0.16
PBX4-202ENST00000557978 NPRL2Q8WTW4 380 aa14.02□□□□□ -0.16
PBX4-202ENST00000557978 AQP3Q92482 292 aa14.02□□□□□ -0.16
PBX4-202ENST00000557978 SGCDQ92629 289 aa14.02□□□□□ -0.16
PBX4-202ENST00000557978 SPSB1Q96BD6 273 aa14.02□□□□□ -0.16
PBX4-202ENST00000557978 A8MV72 311 aaPredicted RBP14.01□□□□□ -0.17
PBX4-202ENST00000557978 J3QT63 122 aa14.01□□□□□ -0.17
PBX4-202ENST00000557978 AKR7A2O43488 359 aa14.01□□□□□ -0.17
PBX4-202ENST00000557978 MRPS14O60783 128 aaKnown RBP14.01□□□□□ -0.17
PBX4-202ENST00000557978 WNT2P09544 360 aa14.01□□□□□ -0.17
PBX4-202ENST00000557978 RPS2P15880 293 aaKnown RBP14.01□□□□□ -0.17
PBX4-202ENST00000557978 GLRA1P23415 457 aa14.01□□□□□ -0.17
PBX4-202ENST00000557978 AZGP1P25311 298 aaKnown RBP14.01□□□□□ -0.17
PBX4-202ENST00000557978 CD80P33681 288 aa14.01□□□□□ -0.17
PBX4-202ENST00000557978 LHFPL2Q6ZUX7 228 aa14.01□□□□□ -0.17
PBX4-202ENST00000557978 Q71RC1 249 aaPredicted RBP14.01□□□□□ -0.17
PBX4-202ENST00000557978 ZFP41Q8N8Y5 198 aa14.01□□□□□ -0.17
PBX4-202ENST00000557978 C19orf18Q8NEA5 215 aa14.01□□□□□ -0.17
PBX4-202ENST00000557978 THRSPQ92748 146 aa14.01□□□□□ -0.17
PBX4-202ENST00000557978 TMEM106AQ96A25 262 aa14.01□□□□□ -0.17
PBX4-202ENST00000557978 C12orf43Q96C57 262 aaKnown RBP14.01□□□□□ -0.17
PBX4-202ENST00000557978 NEIL1Q96FI4 390 aaPredicted RBP14.01□□□□□ -0.17
PBX4-202ENST00000557978 PGLYRP3Q96LB9 341 aa14.01□□□□□ -0.17
PBX4-202ENST00000557978 OPALINQ96PE5 141 aa14.01□□□□□ -0.17
PBX4-202ENST00000557978 PKIBQ9C010 78 aa14.01□□□□□ -0.17
PBX4-202ENST00000557978 YAE1D1Q9NRH1 226 aa14.01□□□□□ -0.17
PBX4-202ENST00000557978 DNAJB11Q9UBS4 358 aa14.01□□□□□ -0.17
PBX4-202ENST00000557978 KCNS2Q9ULS6 477 aa14.01□□□□□ -0.17
PBX4-202ENST00000557978 LRCH1Q9Y2L9 728 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms