RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CPT2P23786 658 aa13.89□□□□□ -0.19
NEK9-211ENST00000557673 CD200P41217 278 aa13.89□□□□□ -0.19
NEK9-211ENST00000557673 MAP2K3P46734 347 aa13.89□□□□□ -0.19
NEK9-211ENST00000557673 GBX2P52951 348 aaPredicted RBP13.89□□□□□ -0.19
NEK9-211ENST00000557673 ZMYND11Q15326 602 aa13.89□□□□□ -0.19
NEK9-211ENST00000557673 ODF4Q2M2E3 257 aa13.89□□□□□ -0.19
NEK9-211ENST00000557673 RBM48Q5RL73 367 aaKnown RBP13.89□□□□□ -0.19
NEK9-211ENST00000557673 ZBTB37Q5TC79 503 aa13.89□□□□□ -0.19
NEK9-211ENST00000557673 RNLSQ5VYX0 342 aa13.89□□□□□ -0.19
NEK9-211ENST00000557673 XAF1Q6GPH4 301 aa13.89□□□□□ -0.19
NEK9-211ENST00000557673 KLBQ86Z14 1044 aa13.89□□□□□ -0.19
NEK9-211ENST00000557673 ZNF420Q8TAQ5 688 aaPredicted RBP13.89□□□□□ -0.19
NEK9-211ENST00000557673 RPS4Y2Q8TD47 263 aa13.89□□□□□ -0.19
NEK9-211ENST00000557673 MYDGFQ969H8 173 aa13.89□□□□□ -0.19
NEK9-211ENST00000557673 DUX5Q96PT3 197 aa13.89□□□□□ -0.19
NEK9-211ENST00000557673 MS4A7Q9GZW8 240 aaPredicted RBP13.89□□□□□ -0.19
NEK9-211ENST00000557673 OR5V1Q9UGF6 321 aa13.89□□□□□ -0.19
NEK9-211ENST00000557673 BLOC1S6Q9UL45 172 aa13.89□□□□□ -0.19
NEK9-211ENST00000557673 RHBDD3Q9Y3P4 386 aa13.89□□□□□ -0.19
NEK9-211ENST00000557673 INSIG2Q9Y5U4 225 aa13.89□□□□□ -0.19
NEK9-211ENST00000557673 TGP01266 2768 aa13.89□□□□□ -0.19
NEK9-211ENST00000557673 ZNF816-ZNF321PA0A0X1KG74 233 aa13.88□□□□□ -0.19
NEK9-211ENST00000557673 PTGES3LE9PB15 166 aa13.88□□□□□ -0.19
NEK9-211ENST00000557673 TMEM178BH3BS89 294 aa13.88□□□□□ -0.19
NEK9-211ENST00000557673 SYT7O43581 403 aa13.88□□□□□ -0.19
NEK9-211ENST00000557673 GMDSO60547 372 aa13.88□□□□□ -0.19
NEK9-211ENST00000557673 MTRF1O75570 445 aaKnown RBP13.88□□□□□ -0.19
NEK9-211ENST00000557673 LALBAP00709 142 aa13.88□□□□□ -0.19
NEK9-211ENST00000557673 CST4P01036 141 aa13.88□□□□□ -0.19
NEK9-211ENST00000557673 ISG15P05161 165 aa13.88□□□□□ -0.19
NEK9-211ENST00000557673 FAHP16930 419 aa13.88□□□□□ -0.19
NEK9-211ENST00000557673 SRP9P49458 86 aaKnown RBP13.88□□□□□ -0.19
NEK9-211ENST00000557673 BTG1P62324 171 aa13.88□□□□□ -0.19
NEK9-211ENST00000557673 DOC2BQ14184 412 aa13.88□□□□□ -0.19
NEK9-211ENST00000557673 CDK5R1Q15078 307 aa13.88□□□□□ -0.19
NEK9-211ENST00000557673 ESCO2Q56NI9 601 aa13.88□□□□□ -0.19
NEK9-211ENST00000557673 KRT74Q7RTS7 529 aa13.88□□□□□ -0.19
NEK9-211ENST00000557673 LRRC28Q86X40 367 aaPredicted RBP13.88□□□□□ -0.19
NEK9-211ENST00000557673 OR14K1Q8NGZ2 314 aa13.88□□□□□ -0.19
NEK9-211ENST00000557673 CDCA4Q9BXL8 241 aa13.88□□□□□ -0.19
NEK9-211ENST00000557673 TRIM36Q9NQ86 728 aa13.88□□□□□ -0.19
NEK9-211ENST00000557673 TMEM212A6NML5 194 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 A8MXK9 166 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 TRAPPC2LH3BP13 241 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 H3BSH0 61 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 RGS10O43665 173 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 PTBP3O95758 552 aaKnown RBP13.87□□□□□ -0.19
NEK9-211ENST00000557673 CYB5R3P00387 301 aaPredicted RBP13.87□□□□□ -0.19
NEK9-211ENST00000557673 MT-ND2P03891 347 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 PPIAL4GP0DN37 164 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 GNALP38405 381 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 GATA4P43694 442 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 GTF2A1P52655 376 aaPredicted RBP13.87□□□□□ -0.19
NEK9-211ENST00000557673 WNT4P56705 351 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 GABARAPL2P60520 117 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 RIPPLY1Q0D2K3 151 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 PRDX4Q13162 271 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 IRF3Q14653 427 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 CCDC58Q4VC31 144 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 KLF17Q5JT82 389 aaPredicted RBP13.87□□□□□ -0.19
NEK9-211ENST00000557673 TMEM244Q5VVB8 128 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 MOGAT3Q86VF5 341 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 MUC20Q8N307 709 aaPredicted RBP13.87□□□□□ -0.19
NEK9-211ENST00000557673 CELF2-AS1Q8N7Q2 184 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 CCDC54Q8NEL0 328 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 OR10AC1Q8NH08 325 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 HPSE2Q8WWQ2 592 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 ITPKCQ96DU7 683 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 MND1Q9BWT6 205 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 PPP1R3EQ9H7J1 279 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 ABCB9Q9NP78 766 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 ERVK-18Q9QC07 812 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 ENPP5Q9UJA9 477 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 PIGLQ9Y2B2 252 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 MPC1Q9Y5U8 109 aa13.87□□□□□ -0.19
NEK9-211ENST00000557673 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.86□□□□□ -0.19
NEK9-211ENST00000557673 IFNL4K9M1U5 179 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 ZFPL1O95159 310 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 ZNF205O95201 554 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 MDH2P40926 338 aaKnown RBP13.86□□□□□ -0.19
NEK9-211ENST00000557673 SEC61A1P61619 476 aaKnown RBP13.86□□□□□ -0.19
NEK9-211ENST00000557673 MAB21L1Q13394 359 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 TMEM42Q69YG0 159 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 RPL22L1Q6P5R6 122 aaKnown RBP13.86□□□□□ -0.19
NEK9-211ENST00000557673 BTNL3Q6UXE8 466 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 PRSS48Q7RTY5 328 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 ZDHHC23Q8IYP9 409 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 RDH10Q8IZV5 341 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 BCL6BQ8N143 479 aaPredicted RBP13.86□□□□□ -0.19
NEK9-211ENST00000557673 ZNF676Q8N7Q3 588 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 NANOGP1Q8N7R0 232 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 SPERTQ8NA61 448 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 OR8S1Q8NH09 359 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 GATAD2BQ8WXI9 593 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 SMIM19Q96E16 107 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 C1orf147Q96MC9 270 aaPredicted RBP13.86□□□□□ -0.19
NEK9-211ENST00000557673 PDCD1LG2Q9BQ51 273 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 FGF23Q9GZV9 251 aaPredicted RBP13.86□□□□□ -0.19
NEK9-211ENST00000557673 PLEKHA1Q9HB21 404 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 BABAM2Q9NXR7 383 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms