RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 VDAC3Q9Y277 283 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 MRPS17Q9Y2R5 130 aaKnown RBP14.31□□□□□ -0.12
SHMT2-232ENST00000557487 KCNIP3Q9Y2W7 256 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 AMDHD2Q9Y303 409 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 A0A1W2PR77 199 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 H3BML4 177 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 SDCBPO00560 298 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-232ENST00000557487 SNCAP37840 140 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 GLP1RP43220 463 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 NUBP1P53384 320 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 HNRNPKP61978 463 aaKnown RBP eCLIP14.31□□□□□ -0.12
SHMT2-232ENST00000557487 PLPPR5Q32ZL2 321 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 LANCL3Q6ZV70 420 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 FAM57BQ71RH2 274 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 PRSS58Q8IYP2 241 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 ZFP82Q8N141 532 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 OR5L2Q8NGL0 311 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 TCEAL3Q969E4 200 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 SMDT1Q9H4I9 107 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 RGCCQ9H4X1 137 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 V9GYS6 101 aa14.31□□□□□ -0.12
SHMT2-232ENST00000557487 TDRD6O60522 2096 aaKnown RBP14.3□□□□□ -0.12
SHMT2-232ENST00000557487 A0A1W2PP11 408 aa14.3□□□□□ -0.12
SHMT2-232ENST00000557487 DUX1O43812 170 aa14.3□□□□□ -0.12
SHMT2-232ENST00000557487 KNG1P01042 644 aa14.3□□□□□ -0.12
SHMT2-232ENST00000557487 DANCRP0C864 163 aa14.3□□□□□ -0.12
SHMT2-232ENST00000557487 SNRPEP62304 92 aaKnown RBP14.3□□□□□ -0.12
SHMT2-232ENST00000557487 SPEM2Q0P670 501 aa14.3□□□□□ -0.12
SHMT2-232ENST00000557487 RHEBQ15382 184 aa14.3□□□□□ -0.12
SHMT2-232ENST00000557487 APCDD1LQ8NCL9 501 aa14.3□□□□□ -0.12
SHMT2-232ENST00000557487 NFAM1Q8NET5 270 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-232ENST00000557487 SEMA6DQ8NFY4 1073 aa14.3□□□□□ -0.12
SHMT2-232ENST00000557487 MALSU1Q96EH3 234 aa14.3□□□□□ -0.12
SHMT2-232ENST00000557487 PGAM5Q96HS1 289 aa14.3□□□□□ -0.12
SHMT2-232ENST00000557487 AKR1E2Q96JD6 320 aa14.3□□□□□ -0.12
SHMT2-232ENST00000557487 PCNX3Q9H6A9 2034 aa14.3□□□□□ -0.12
SHMT2-232ENST00000557487 ZNF319Q9P2F9 582 aa14.3□□□□□ -0.12
SHMT2-232ENST00000557487 SLCO1B1Q9Y6L6 691 aa14.3□□□□□ -0.12
SHMT2-232ENST00000557487 IGHV1OR21-1A0A087WYE8 117 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 ZNF726A6NNF4 738 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 DHRS3O75911 302 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 RAB1AP62820 205 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 GGNBP1Q5YKI7 109 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 OR2A2Q6IF42 318 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 LRTM2Q8N967 370 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 LFNGQ8NES3 379 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 HAS2Q92819 552 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 RELTQ969Z4 430 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 CLDN23Q96B33 292 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 GALNT14Q96FL9 552 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 CLCC1Q96S66 551 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 NUDT22Q9BRQ3 303 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 GINS3Q9BRX5 216 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 PBDC1Q9BVG4 233 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 CHST5Q9GZS9 411 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 RPS10P5Q9NQ39 176 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 HDGFL3Q9Y3E1 203 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 SIT1Q9Y3P8 196 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 IGLV3-12A0A075B6K2 115 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 A0A1B0GW64 132 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 C9JQL5 133 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 RER1O15258 196 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 GPR137BO60478 399 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 OR8U9P0C7N5 309 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 SLC2A1P11166 492 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 FOLR1P15328 257 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 GUCA1AP43080 201 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-232ENST00000557487 ACY1Q03154 408 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 HGFACQ04756 655 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 TMEM105Q8N8V8 129 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 SLC38A9Q8NBW4 561 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 OR8U1Q8NH10 309 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 ZNF2Q9BSG1 426 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-232ENST00000557487 LMAN1LQ9HAT1 526 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 SEBOXQ9HB31 216 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-232ENST00000557487 KLRF1Q9NZS2 232 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 PADI1Q9ULC6 663 aa14.29□□□□□ -0.12
SHMT2-232ENST00000557487 AGPAT2O15120 278 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 EFNA2O43921 213 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 QDPRP09417 244 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 ZNF43P17038 809 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 DTYMKP23919 212 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 P2RY1P47900 373 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 PPT1P50897 306 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 GUK1Q16774 197 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 DEFB133Q30KQ1 61 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 C1orf189Q5VU69 101 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 HIST2H3AQ71DI3 136 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 ANKRD37Q7Z713 158 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 POC1BQ8TC44 478 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 SOX7Q9BT81 388 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 SUCNR1Q9BXA5 334 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 PCED1AQ9H1Q7 454 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 PLA2G2EQ9NZK7 142 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 HSF4Q9ULV5 492 aa14.28□□□□□ -0.12
SHMT2-232ENST00000557487 C7orf77A4D0Y5 90 aa14.27□□□□□ -0.12
SHMT2-232ENST00000557487 C2orf72A6NCS6 295 aa14.27□□□□□ -0.12
SHMT2-232ENST00000557487 STMND1H3BQB6 276 aa14.27□□□□□ -0.12
SHMT2-232ENST00000557487 SGCEO43556 437 aa14.27□□□□□ -0.12
SHMT2-232ENST00000557487 ZNF44P15621 663 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms