RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TGFBR2P37173 567 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 CD200P41217 278 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 RAP2BP61225 183 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 PRB3Q04118 309 aaPredicted RBP4.79□□□□□ -1.64
VPS33B-207ENST00000557470 OR8B8Q15620 311 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 SNAPC1Q16533 368 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 AGKQ53H12 422 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 MESTQ5EB52 335 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 AGBL2Q5U5Z8 902 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 SLC35E4Q6ICL7 350 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 C11orf87Q6NUJ2 197 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 CENPVQ7Z7K6 275 aaPredicted RBP4.79□□□□□ -1.64
VPS33B-207ENST00000557470 FGFRL1Q8N441 504 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 BOLLQ8N9W6 283 aaKnown RBP4.79□□□□□ -1.64
VPS33B-207ENST00000557470 OR5L1Q8NGL2 311 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 OR51A7Q8NH64 312 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 LRRC8CQ8TDW0 803 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 ERGIC1Q969X5 290 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 SLAMF9Q96A28 289 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 APOBEC3DQ96AK3 386 aaPredicted RBP4.79□□□□□ -1.64
VPS33B-207ENST00000557470 BPIFA2Q96DR5 249 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 ATP6V1G3Q96LB4 118 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 SIKE1Q9BRV8 207 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 POLR2J2Q9GZM3 115 aaKnown RBP4.79□□□□□ -1.64
VPS33B-207ENST00000557470 POLR2J3Q9H1A7 115 aaKnown RBP4.79□□□□□ -1.64
VPS33B-207ENST00000557470 PPA2Q9H2U2 334 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 KAT8Q9H7Z6 458 aaKnown RBP4.79□□□□□ -1.64
VPS33B-207ENST00000557470 TMEM100Q9NV29 134 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 A4GNTQ9UNA3 340 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 FAM32AQ9Y421 112 aaKnown RBP4.79□□□□□ -1.64
VPS33B-207ENST00000557470 A0A1B0GVI7 797 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 A0A1B0GW55 424 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 A0A1W2PRD5 423 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 A0A1W2PRF3 423 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 A0A1W2PRM7 423 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 XKRY2A2RUG3 117 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 PRSS37A4D1T9 235 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 ANKRD61A6NGH8 418 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 NPIPB6E9PJ23 425 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 RNASEK-C17orf49H0YIS7 233 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 DVL1O14640 695 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 IMPA2O14732 288 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 GYPAP02724 150 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 DUX4L2P0CJ85 424 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 DUX4L3P0CJ86 424 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 DUX4L4P0CJ87 422 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 DUX4L5P0CJ88 424 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 DUX4L6P0CJ89 424 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 DUX4L7P0CJ90 424 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 ZNF26P17031 533 aaPredicted RBP4.78□□□□□ -1.64
VPS33B-207ENST00000557470 CALB2P22676 271 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 PRKACBP22694 351 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 OR1E2P47887 323 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 CENPAP49450 140 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 GZMMP51124 257 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 ZNF134P52741 427 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 EFNB2P52799 333 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 DLX1P56177 255 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 MZT1Q08AG7 82 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 KLRD1Q13241 179 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 ALKBH1Q13686 389 aaKnown RBP4.78□□□□□ -1.64
VPS33B-207ENST00000557470 CYLC2Q14093 348 aaPredicted RBP4.78□□□□□ -1.64
VPS33B-207ENST00000557470 GK2Q14410 553 aaPredicted RBP4.78□□□□□ -1.64
VPS33B-207ENST00000557470 KCNJ8Q15842 424 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 RSPO1Q2MKA7 263 aaPredicted RBP4.78□□□□□ -1.64
VPS33B-207ENST00000557470 VMACQ2NL98 169 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 KCTD21Q4G0X4 260 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 CDONQ4KMG0 1287 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 FAM90A2PQ658T7 463 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 CORO6Q6QEF8 472 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 DUX4L9Q6RFH8 374 aaPredicted RBP4.78□□□□□ -1.64
VPS33B-207ENST00000557470 ETV3LQ6ZN32 361 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 CFAP77Q6ZQR2 320 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 COLCA1Q6ZS62 124 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 OAFQ86UD1 273 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 NRMQ8IXM6 262 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 LYG1Q8N1E2 194 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 KLHDC1Q8N7A1 406 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 STPG3Q8N7X2 389 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 OR13C2Q8NGS9 318 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 OR10A6Q8NH74 314 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 OR5R1Q8NH85 324 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 RASSF5Q8WWW0 418 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 PHF21AQ96BD5 680 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 Q96M85 177 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 CDRT15Q96T59 188 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 TPPP3Q9BW30 176 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 HCAR1Q9BXC0 346 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 NDEL1Q9GZM8 345 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 RERGLQ9H628 205 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 GORASP2Q9H8Y8 452 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 FN3KRPQ9HA64 309 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 PALMDQ9NP74 551 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 SIRT7Q9NRC8 400 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 KIAA1456Q9P272 454 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 ONECUT1Q9UBC0 465 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 RNF7Q9UBF6 113 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 DUX4Q9UBX2 424 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 RPUSD1Q9UJJ7 312 aaKnown RBP4.78□□□□□ -1.64
VPS33B-207ENST00000557470 POLR1DQ9Y2S0 133 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms