RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 MEIOCA2RUB1 952 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 GSC2O15499 205 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 ZNF254O75437 659 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 PSG2P11465 335 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 SAA4P35542 130 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 ACSM1Q08AH1 577 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 RIPPLY1Q0D2K3 151 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 SNAPC1Q16533 368 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 CEP78Q5JTW2 689 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 MOB3CQ70IA8 216 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 TRPM8Q7Z2W7 1104 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 THAP5Q7Z6K1 395 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 PNKDQ8N490 385 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 ZNRF1Q8ND25 227 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 OR5R1Q8NH85 324 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 PBOV1Q9GZY1 135 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 RASL12Q9NYN1 266 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 TVP23BQ9NYZ1 205 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 DNAJB9Q9UBS3 223 aa13□□□□□ -0.33
TUBB3-213ENST00000557262 SF3B6Q9Y3B4 125 aaKnown RBP13□□□□□ -0.33
TUBB3-213ENST00000557262 TGP01266 2768 aa12.99□□□□□ -0.33
TUBB3-213ENST00000557262 OR5B21A6NL26 309 aa12.99□□□□□ -0.33
TUBB3-213ENST00000557262 PSMD9O00233 223 aa12.99□□□□□ -0.33
TUBB3-213ENST00000557262 CRISP1P54107 249 aa12.99□□□□□ -0.33
TUBB3-213ENST00000557262 CBX1P83916 185 aa12.99□□□□□ -0.33
TUBB3-213ENST00000557262 DMRTC1Q5HYR2 192 aa12.99□□□□□ -0.33
TUBB3-213ENST00000557262 ZBTB37Q5TC79 503 aa12.99□□□□□ -0.33
TUBB3-213ENST00000557262 ZNF679Q8IYX0 411 aa12.99□□□□□ -0.33
TUBB3-213ENST00000557262 OR5D13Q8NGL4 314 aa12.99□□□□□ -0.33
TUBB3-213ENST00000557262 ASB17Q8WXJ9 295 aa12.99□□□□□ -0.33
TUBB3-213ENST00000557262 AQP3Q92482 292 aa12.99□□□□□ -0.33
TUBB3-213ENST00000557262 UBE2FQ969M7 185 aa12.99□□□□□ -0.33
TUBB3-213ENST00000557262 SDSLQ96GA7 329 aa12.99□□□□□ -0.33
TUBB3-213ENST00000557262 ZNF222Q9UK12 451 aa12.99□□□□□ -0.33
TUBB3-213ENST00000557262 TMEM14AQ9Y6G1 99 aa12.99□□□□□ -0.33
TUBB3-213ENST00000557262 TRBV23-1A0A0A0MS06 115 aa12.98□□□□□ -0.33
TUBB3-213ENST00000557262 ANKRD61A6NGH8 418 aa12.98□□□□□ -0.33
TUBB3-213ENST00000557262 H0YAE9 185 aa12.98□□□□□ -0.33
TUBB3-213ENST00000557262 IGLV3-1P01715 115 aa12.98□□□□□ -0.33
TUBB3-213ENST00000557262 ROM1Q03395 351 aa12.98□□□□□ -0.33
TUBB3-213ENST00000557262 LCN1P1Q5VSP4 162 aa12.98□□□□□ -0.33
TUBB3-213ENST00000557262 SLC35E4Q6ICL7 350 aa12.98□□□□□ -0.33
TUBB3-213ENST00000557262 HAGHLQ6PII5 290 aaPredicted RBP12.98□□□□□ -0.33
TUBB3-213ENST00000557262 SPATA24Q86W54 205 aa12.98□□□□□ -0.33
TUBB3-213ENST00000557262 COMMD2Q86X83 199 aa12.98□□□□□ -0.33
TUBB3-213ENST00000557262 BEND2Q8NDZ0 799 aa12.98□□□□□ -0.33
TUBB3-213ENST00000557262 TMEM185AQ8NFB2 350 aa12.98□□□□□ -0.33
TUBB3-213ENST00000557262 OR51E1Q8TCB6 317 aa12.98□□□□□ -0.33
TUBB3-213ENST00000557262 DNAJC9Q8WXX5 260 aa12.98□□□□□ -0.33
TUBB3-213ENST00000557262 PPP1R14AQ96A00 147 aa12.98□□□□□ -0.33
TUBB3-213ENST00000557262 ELL3Q9HB65 397 aaPredicted RBP12.98□□□□□ -0.33
TUBB3-213ENST00000557262 GPR84Q9NQS5 396 aa12.98□□□□□ -0.33
TUBB3-213ENST00000557262 CCDC182A6NF36 153 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 SLC22A31A6NKX4 558 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 FKBP6O75344 327 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 MTRF1O75570 445 aaKnown RBP12.97□□□□□ -0.33
TUBB3-213ENST00000557262 NRASP01111 189 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 MRPL3P09001 348 aaKnown RBP12.97□□□□□ -0.33
TUBB3-213ENST00000557262 RIDAP52758 137 aaKnown RBP12.97□□□□□ -0.33
TUBB3-213ENST00000557262 CAPZA1P52907 286 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 FLOT2Q14254 428 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 ZNF829Q3KNS6 432 aaPredicted RBP12.97□□□□□ -0.33
TUBB3-213ENST00000557262 PLCXD3Q63HM9 321 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 HCP5Q6MZN7 132 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 ACP7Q6ZNF0 438 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 FAM185AQ8N0U4 392 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 NRBF2Q96F24 287 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 OR8B4Q96RC9 309 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 FAM234AQ9H0X4 552 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 PPA2Q9H2U2 334 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 PAPOLBQ9NRJ5 636 aaKnown RBP12.97□□□□□ -0.33
TUBB3-213ENST00000557262 FBLN5Q9UBX5 448 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 NUFIP1Q9UHK0 495 aaKnown RBP12.97□□□□□ -0.33
TUBB3-213ENST00000557262 ENPP5Q9UJA9 477 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 PIGLQ9Y2B2 252 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 NOTCH1P46531 2555 aa12.97□□□□□ -0.33
TUBB3-213ENST00000557262 TCRBV3S1A0A5B6 114 aa12.96□□□□□ -0.33
TUBB3-213ENST00000557262 RFPL4AA6NLU0 287 aa12.96□□□□□ -0.33
TUBB3-213ENST00000557262 RFPL4AL1F8VTS6 287 aa12.96□□□□□ -0.33
TUBB3-213ENST00000557262 GYG2O15488 501 aa12.96□□□□□ -0.33
TUBB3-213ENST00000557262 FAHP16930 419 aa12.96□□□□□ -0.33
TUBB3-213ENST00000557262 ACTR3P61158 418 aa12.96□□□□□ -0.33
TUBB3-213ENST00000557262 PTGES3Q15185 160 aaKnown RBP12.96□□□□□ -0.33
TUBB3-213ENST00000557262 ZNF684Q5T5D7 378 aa12.96□□□□□ -0.33
TUBB3-213ENST00000557262 POC1AQ8NBT0 407 aa12.96□□□□□ -0.33
TUBB3-213ENST00000557262 SSX3Q99909 188 aa12.96□□□□□ -0.33
TUBB3-213ENST00000557262 MEGF9Q9H1U4 602 aa12.96□□□□□ -0.33
TUBB3-213ENST00000557262 HEXA-AS1Q9H8Q6 139 aa12.96□□□□□ -0.33
TUBB3-213ENST00000557262 H2AFY2Q9P0M6 372 aaPredicted RBP12.96□□□□□ -0.33
TUBB3-213ENST00000557262 IKZF2Q9UKS7 526 aa12.96□□□□□ -0.33
TUBB3-213ENST00000557262 COPS3Q9UNS2 423 aa12.96□□□□□ -0.33
TUBB3-213ENST00000557262 A0A1W2PPH5 198 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 PRR32B1ATL7 298 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 H3BUX3 64 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 ANGPTL7O43827 346 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 NOS1APO75052 506 aaPredicted RBP12.95□□□□□ -0.34
TUBB3-213ENST00000557262 DHRS3O75911 302 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 TTRP02766 147 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 PRDX2P32119 198 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 DAPP51397 102 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms