RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 SSX1Q16384 188 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 ZFAND6Q6FIF0 208 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 RTL6Q6ICC9 239 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 TIFABQ6ZNK6 161 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 ZNF621Q6ZSS3 439 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 NEGR1Q7Z3B1 354 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 ACOT1Q86TX2 421 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 LRRC25Q8N386 305 aaPredicted RBP5.44□□□□□ -1.54
TDP1-215ENST00000556498 KCNRGQ8N5I3 272 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 LINC01356Q8N9X3 169 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 OR4B1Q8NGF8 309 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 OR5D16Q8NGK9 328 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 OR1L4Q8NGR5 311 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 C16orf52Q8NHV5 167 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 ZNF675Q8TD23 568 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 ST6GALNAC6Q969X2 333 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 C8orf44Q96CB5 159 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 IMP4Q96G21 291 aaKnown RBP5.44□□□□□ -1.54
TDP1-215ENST00000556498 AJUBAQ96IF1 538 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 ZNF75AQ96N20 296 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 P2RX4Q99571 388 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 TIMP4Q99727 224 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 SRSF8Q9BRL6 282 aaKnown RBP5.44□□□□□ -1.54
TDP1-215ENST00000556498 ABHD14AQ9BUJ0 271 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 C1orf43Q9BWL3 253 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 CDCA4Q9BXL8 241 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 PECRQ9BY49 303 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 OR11A1Q9GZK7 315 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 C20orf27Q9GZN8 174 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 MAP1LC3BQ9GZQ8 125 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 LAT2Q9GZY6 243 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 IL25Q9H293 177 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 CALHM2Q9HA72 323 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 LANCL2Q9NS86 450 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 TFCP2L1Q9NZI6 479 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 THAP10Q9P2Z0 257 aaPredicted RBP5.44□□□□□ -1.54
TDP1-215ENST00000556498 SLC23A2Q9UGH3 650 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 MMP17Q9ULZ9 603 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 ETV7Q9Y603 341 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 A0A1W2PRD5 423 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 RNF222A6NCQ9 220 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 GAGE12HA6NDE8 117 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 IDSB3KWA1 339 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 E7EQ34 232 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 K7EPK0 472 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 DCTN6O00399 190 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 SDHDO14521 159 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 ZNF195O14628 629 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 BCL2L11O43521 198 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 TRAF3IP2O43734 574 aaPredicted RBP5.43□□□□□ -1.54
TDP1-215ENST00000556498 OR2J3O76001 311 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 NUDT3O95989 172 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 CHRM4P08173 479 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 FTH1P19P0C7X4 201 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 TNFRSF1BP20333 461 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 IDSP22304 550 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 PRKACGP22612 351 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 TIA1P31483 386 aaKnown RBP eCLIP5.43□□□□□ -1.54
TDP1-215ENST00000556498 PTH2RP49190 550 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 ATP4BP51164 291 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 PITX1P78337 314 aaPredicted RBP5.43□□□□□ -1.54
TDP1-215ENST00000556498 BTG2P78543 158 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 CDK3Q00526 305 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 MFGE8Q08431 387 aaPredicted RBP5.43□□□□□ -1.54
TDP1-215ENST00000556498 LY6DQ14210 128 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 MEF2DQ14814 521 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 PMVKQ15126 192 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 ZIC1Q15915 447 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 CTU2Q2VPK5 515 aaKnown RBP5.43□□□□□ -1.54
TDP1-215ENST00000556498 TRMT12Q53H54 448 aaKnown RBP5.43□□□□□ -1.54
TDP1-215ENST00000556498 FAM162BQ5T6X4 162 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 TXNDC8Q6A555 127 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 PWWP2BQ6NUJ5 590 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 RGMBQ6NW40 437 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 C8orf82Q6P1X6 216 aaPredicted RBP5.43□□□□□ -1.54
TDP1-215ENST00000556498 NIPAL3Q6P499 406 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 ZNF549Q6P9A3 640 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 TEX43Q6ZNM6 134 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 TPRG1Q6ZUI0 275 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 GKN2Q86XP6 184 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 TMEM25Q86YD3 366 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 ZDHHC23Q8IYP9 409 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 CA13Q8N1Q1 262 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 FAM71E2Q8N5Q1 922 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 C5orf17Q8NAS9 161 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 KIR2DL5BQ8NHK3 375 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 NEIL3Q8TAT5 605 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 PTPMT1Q8WUK0 201 aaPredicted RBP5.43□□□□□ -1.54
TDP1-215ENST00000556498 PIGCQ92535 297 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 TSLPQ969D9 159 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 PTX4Q96A99 478 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 VOPP1Q96AW1 172 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 SLC35A4Q96G79 324 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 GRAMD2BQ96HH9 432 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 KCTD7Q96MP8 289 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 GNRHR2Q96P88 292 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 GINS3Q9BRX5 216 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 ADAT1Q9BUB4 502 aaKnown RBP5.43□□□□□ -1.54
TDP1-215ENST00000556498 EFCAB11Q9BUY7 163 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 SCNM1Q9BWG6 230 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms