RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 OR8B12Q8NGG6 310 aa13.36□□□□□ -0.27
ARHGEF40-207ENST00000556399 FAAP24Q9BTP7 215 aa13.36□□□□□ -0.27
ARHGEF40-207ENST00000556399 TMPRSS5Q9H3S3 457 aa13.36□□□□□ -0.27
ARHGEF40-207ENST00000556399 PLEKHF2Q9H8W4 249 aa13.36□□□□□ -0.27
ARHGEF40-207ENST00000556399 TIMM10BQ9Y5J6 103 aa13.36□□□□□ -0.27
ARHGEF40-207ENST00000556399 ZNF727A8MUV8 499 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 HS3ST1O14792 307 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 DAOP14920 347 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 EFNB1P98172 346 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 TMEM92Q6UXU6 159 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 C20orf196Q8IYI0 205 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 SAMD10Q9BYL1 202 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 PPP5D1E7EU14 171 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 HLA-HP01893 362 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 CTXN2P0C2S0 81 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 NFYBP25208 207 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 RPP30P78346 268 aaKnown RBP13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 HTD2P86397 168 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 CATR1Q13166 79 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 MCHR2Q969V1 340 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 CABLES2Q9BTV7 478 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 SELENOVP59797 346 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 LINC01590Q5TEZ4 76 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 SLC25A26Q70HW3 274 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 ZNF429Q86V71 674 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 FBXL14Q8N1E6 418 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 OR1L3Q8NH93 324 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 PTPMT1Q8WUK0 201 aaPredicted RBP13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 ALPK2Q86TB3 2170 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 hCG_1809904A0A1W2PP81 198 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 A0A1W2PR64 198 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 A0A1W2PRV1 198 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 DHRS3O75911 302 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 ONECUT2O95948 504 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 ARG1P05089 322 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 ZNF787Q6DD87 383 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 JMJD6Q6NYC1 403 aaPredicted RBP13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 YRDCQ86U90 279 aaKnown RBP13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 TMEM104Q8NE00 496 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 HPSE2Q8WWQ2 592 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 LIN37Q96GY3 246 aaPredicted RBP13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 CALHM2Q9HA72 323 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 PIPOXQ9P0Z9 390 aa13.35□□□□□ -0.27
ARHGEF40-207ENST00000556399 H7BYZ3 331 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 FOXS1O43638 330 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 SCAF4O95104 1147 aaKnown RBP13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 MT-CO2P00403 227 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 BCKDHBP21953 392 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 CXCL12P48061 93 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 INSM1Q01101 510 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 PDLIM3Q53GG5 364 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 ZNF610Q8N9Z0 462 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 OR6S1Q8NH40 331 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 PTX4Q96A99 478 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 ADAT3Q96EY9 351 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 TP53TG5Q9Y2B4 290 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 AMDHD2Q9Y303 409 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 A0A1W2PQD3 144 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 OR5AC1P0C628 307 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 HLA-DOBP13765 273 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 RPS19BP1Q86WX3 136 aaKnown RBP13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 NECAP1Q8NC96 275 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 AGBL5Q8NDL9 886 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 WNT2BQ93097 391 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 PECRQ9BY49 303 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 BOKQ9UMX3 212 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 BTBD17A6NE02 478 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 C17orf112F2Z3M2 114 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 PNPP00491 289 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 MYF5P13349 255 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 KIR2DL1P43626 348 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 LINC00518Q8N0U6 118 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 FOXQ1Q9C009 403 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 NAA60Q9H7X0 242 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 NPTNQ9Y639 398 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 LMO7DNF2Z398 122 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 H3BP45 60 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 F10P00742 488 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 ZBTB25P24278 435 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 PDCD1Q15116 288 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 SLC26A10Q8NG04 563 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 RNF133Q8WVZ7 376 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 ZNF251Q9BRH9 671 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 GCM1Q9NP62 436 aa13.34□□□□□ -0.27
ARHGEF40-207ENST00000556399 C7orf77A4D0Y5 90 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 SMIM10L1P0DMW3 83 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 MMP16P51512 607 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 TMEM41BQ5BJD5 291 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 Q6ZS52 159 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 FAM185AQ8N0U4 392 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 RGP1Q92546 391 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 SPSB1Q96BD6 273 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 SMIM10Q96HG1 83 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 NRIP2Q9BQI9 281 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 TMED3Q9Y3Q3 217 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 OR6C6A6NF89 314 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 SMIM6P0DI80 62 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 FSTP19883 344 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 RPS11P62280 158 aaKnown RBP eCLIP13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 NAAAQ02083 359 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms