RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 WDR38Q5JTN6 314 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 TEX30Q5JUR7 227 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 CGB2Q6NT52 195 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 C11orf88Q6PI97 169 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 DUX4L9Q6RFH8 374 aaPredicted RBP7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 WDR82Q6UXN9 313 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 SLC36A1Q7Z2H8 476 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 WDR86Q86TI4 376 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 OR2AE1Q8NHA4 323 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 ST8SIA4Q92187 359 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 SGK3Q96BR1 496 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 RCN3Q96D15 328 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 DCTN5Q9BTE1 182 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 ADAT1Q9BUB4 502 aaKnown RBP7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 DNTTIP1Q9H147 329 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 SEMA6AQ9H2E6 1030 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 OR52D1Q9H346 318 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 RPRD1BQ9NQG5 326 aaKnown RBP7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 DCAF13Q9NV06 445 aaKnown RBP7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 DUX4Q9UBX2 424 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 CD300AQ9UGN4 299 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 FAM32AQ9Y421 112 aaKnown RBP7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 KMT2CQ8NEZ4 4911 aaKnown RBP7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 M0R1W7 72 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 ACOT8O14734 319 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 HNRNPCP07910 306 aaKnown RBP eCLIP7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 IL6RP08887 468 aaPredicted RBP7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 PSKH1P11801 424 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 ZNF823P16415 610 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 EEF1B2P24534 225 aaKnown RBP7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 GABRA5P31644 462 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 GRK5P34947 590 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 GSSP48637 474 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 SMIM11AP58511 58 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 FAM3AP98173 230 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 AANATQ16613 207 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 FGD3Q5JSP0 725 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 HCP5Q6MZN7 132 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 HACD2Q6Y1H2 254 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 Q6ZTK2 550 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 PRSS45Q7RTY3 260 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 CYB561A3Q8NBI2 242 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 OR1M1Q8NGA1 313 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 OR56B2PQ8NGI1 322 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 OR52J3Q8NH60 311 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 LRRC29Q8WV35 223 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 DPF1Q92782 380 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 SEH1LQ96EE3 360 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 OPA3Q9H6K4 179 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 EFCAB1Q9HAE3 211 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 ABCD2Q9UBJ2 740 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 MAB21L2Q9Y586 359 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 DNAH9Q9NYC9 4486 aa7.26□□□□□ -1.25
GTF2A1-204ENST00000556268 hCG_1807616A0A1W2PRN6 198 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 BTBD17A6NE02 478 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 CGB1A6NKQ9 187 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 A6NLC8 198 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 H0YIZ8 118 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 NDUFAB1O14561 156 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 NDUFB3O43676 98 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 TIPRLO75663 272 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 DIRAS1O95057 198 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 HLA-DQA2P01906 255 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 PRB2P02812 416 aaPredicted RBP7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 SEMG1P04279 462 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 TROVE2P10155 538 aaKnown RBP eCLIP7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 COX4I1P13073 169 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 NCK1P16333 377 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 SAA4P35542 130 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 NAA10P41227 235 aaPredicted RBP7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 RPS27P42677 84 aaKnown RBP7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 DLX1P56177 255 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 PRB3Q04118 309 aaPredicted RBP7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 KLHL12Q53G59 568 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 LRRC10Q5BKY1 277 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 STUMQ69YW2 141 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 GLYATQ6IB77 296 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 KRT74Q7RTS7 529 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 SLC16A9Q7RTY1 509 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 OVCH2Q7RTZ1 564 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 DPY19L4Q7Z388 723 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 PNKDQ8N490 385 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 FAM216BQ8N7L0 139 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 WFDC9Q8NEX5 89 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 OR10Z1Q8NGY1 313 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 ANGPTL6Q8NI99 470 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 PIFOQ8TCI5 191 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 C17orf50Q8WW18 174 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 RAB3IPQ96QF0 476 aaPredicted RBP7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 IFT27Q9BW83 186 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 FAM234AQ9H0X4 552 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 PPA2Q9H2U2 334 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 PPP1R3EQ9H7J1 279 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 GORASP2Q9H8Y8 452 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 VIPAS39Q9H9C1 493 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 KRCC1Q9NPI7 259 aaPredicted RBP7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 SIRT7Q9NRC8 400 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 HAO2Q9NYQ3 351 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 IL20Q9NYY1 176 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms