RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 FAM221AA4D161 298 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 LRP5LA4QPB2 252 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 C17orf100A8MU93 164 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 CTAG2O75638 210 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 CYB5AP00167 134 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 IGHV1-46P01743 117 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 TMEM225BP0DP42 221 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 SLC2A2P11168 524 aaPredicted RBP9.38□□□□□ -0.91
TMEM260-208ENST00000555905 CFPP27918 469 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 THBS2P35442 1172 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 PTGFRP43088 359 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 HAAOP46952 286 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 OR3A4PP47883 348 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 POU3F4P49335 361 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 TLE4Q04727 773 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 P2RY14Q15391 338 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 SWI5Q1ZZU3 235 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 MST1LQ2TV78 715 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 ZNF404Q494X3 552 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 AWAT2Q6E213 333 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 ANGPTL5Q86XS5 388 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 CELF2-AS1Q8N7Q2 184 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 ZNF611Q8N823 705 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 MCFD2Q8NI22 146 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 TNFAIP8L1Q8WVP5 186 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 SLIRPQ9GZT3 109 aaKnown RBP9.38□□□□□ -0.91
TMEM260-208ENST00000555905 EGLN1Q9GZT9 426 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 FGF23Q9GZV9 251 aaPredicted RBP9.38□□□□□ -0.91
TMEM260-208ENST00000555905 CLEC4MQ9H2X3 399 aaPredicted RBP9.38□□□□□ -0.91
TMEM260-208ENST00000555905 OR51I2Q9H344 312 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 LIN7BQ9HAP6 207 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 ABRACLQ9P1F3 81 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 PLEKHB1Q9UF11 243 aaPredicted RBP9.38□□□□□ -0.91
TMEM260-208ENST00000555905 MRPS28Q9Y2Q9 187 aaKnown RBP9.38□□□□□ -0.91
TMEM260-208ENST00000555905 COL12A1Q99715 3063 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 ICE1Q9Y2F5 2266 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 J3QT63 122 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 TPD52L2O43399 206 aaKnown RBP9.37□□□□□ -0.91
TMEM260-208ENST00000555905 BPNT1O95861 308 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 PLATP00750 562 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 GRPP07492 148 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 ADH4P08319 380 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 UBBP0CG47 229 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 CALCBP10092 127 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 ARSBP15848 533 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 CD200P41217 278 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 CLDN12P56749 244 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 SCAND1P57086 179 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 TNFAIP6P98066 277 aaPredicted RBP9.37□□□□□ -0.91
TMEM260-208ENST00000555905 PDZK1IP1Q13113 114 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 DYNC1I2Q13409 638 aaKnown RBP9.37□□□□□ -0.91
TMEM260-208ENST00000555905 PCGF3Q3KNV8 242 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 FAM76BQ5HYJ3 339 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 FAM209AQ5JX71 171 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 FAM166AQ6J272 317 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 HAGHLQ6PII5 290 aaPredicted RBP9.37□□□□□ -0.91
TMEM260-208ENST00000555905 RNF144BQ7Z419 303 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 TMEM200AQ86VY9 491 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 LYPD6Q86Y78 171 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 MKXQ8IYA7 352 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 ZSCAN4Q8NAM6 433 aaPredicted RBP9.37□□□□□ -0.91
TMEM260-208ENST00000555905 OR4D6Q8NGJ1 314 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 OR5D18Q8NGL1 313 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 FAM3DQ96BQ1 224 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 OR2V2Q96R30 315 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 NKX3-1Q99801 234 aaPredicted RBP9.37□□□□□ -0.91
TMEM260-208ENST00000555905 PKIBQ9C010 78 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 C6orf62Q9GZU0 229 aaPredicted RBP9.37□□□□□ -0.91
TMEM260-208ENST00000555905 MMP27Q9H306 513 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 ELL3Q9HB65 397 aaPredicted RBP9.37□□□□□ -0.91
TMEM260-208ENST00000555905 DECR2Q9NUI1 292 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 GHRLQ9UBU3 117 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 IL19Q9UHD0 177 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 ING4Q9UNL4 249 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 A3GALT2U3KPV4 340 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 PMF1-BGLAPU3KQ54 211 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 ROS1P08922 2347 aa9.37□□□□□ -0.91
TMEM260-208ENST00000555905 ABCA4P78363 2273 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 SPTAN1Q13813 2472 aaKnown RBP9.36□□□□□ -0.91
TMEM260-208ENST00000555905 A0A075B6Q4 140 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 LOC100289279A0A1B0GTE1 492 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 A0A1W2PPR1 153 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 A6NLC8 198 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 LCE2BO14633 110 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 SPRY1O43609 319 aaPredicted RBP9.36□□□□□ -0.91
TMEM260-208ENST00000555905 CLPXO76031 633 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 F12P00748 615 aaPredicted RBP9.36□□□□□ -0.91
TMEM260-208ENST00000555905 CD55P08174 381 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 SNRPBP14678 240 aaKnown RBP9.36□□□□□ -0.91
TMEM260-208ENST00000555905 TNFRSF1AP19438 455 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 PPOXP50336 477 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 ZP1P60852 638 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 ZNF154Q13106 437 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 MAB21L1Q13394 359 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 GPR176Q14439 515 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 RSU1Q15404 277 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 TESK1Q15569 626 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 GLIPR1L1Q6UWM5 242 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 C20orf204Q6ZNR8 217 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 SLC25A26Q70HW3 274 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms