RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 MTRF1O75570 445 aaKnown RBP11.33□□□□□ -0.6
SNX6-203ENST00000555416 IGHV4-38-2P0DP08 117 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 MUC1P15941 1255 aaPredicted RBP11.33□□□□□ -0.6
SNX6-203ENST00000555416 ZNF19P17023 458 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 ACTC1P68032 377 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 ACTA1P68133 377 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 UBE2V2Q15819 145 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 KCNJ8Q15842 424 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 MICBQ29980 383 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 TUSC1Q2TAM9 212 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 HAGHLQ6PII5 290 aaPredicted RBP11.33□□□□□ -0.6
SNX6-203ENST00000555416 DOK3Q7L591 496 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 ACBD7Q8N6N7 88 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 OR52I1Q8NGK6 324 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 CNIH3Q8TBE1 160 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 NPRL2Q8WTW4 380 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 TMEM158Q8WZ71 300 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 C4orf36Q96KX1 117 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 MRI1Q9BV20 369 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 ERVK-18Q9QC07 812 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 ZNF69Q9UC07 566 aa11.33□□□□□ -0.6
SNX6-203ENST00000555416 IGKV1D-17A0A075B6S4 117 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 IGKV1-27A0A075B6S5 117 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 A0A1B0GVI7 797 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 OR5B21A6NL26 309 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 SYT7O43581 403 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 NDUFA2O43678 99 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 IGHA1P01876 353 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 TGM4P49221 684 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 FGF12P61328 243 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 ADARB1P78563 741 aaKnown RBP11.32□□□□□ -0.6
SNX6-203ENST00000555416 GALEQ14376 348 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 ATPAF1Q5TC12 328 aaPredicted RBP11.32□□□□□ -0.6
SNX6-203ENST00000555416 FDX2Q6P4F2 183 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 BTN2A1Q7KYR7 527 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 FAM220AQ7Z4H9 259 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 ANGPTL5Q86XS5 388 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 CALHM1Q8IU99 346 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 BATF2Q8N1L9 274 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 ANGPTL6Q8NI99 470 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 TRMT10AQ8TBZ6 339 aaKnown RBP11.32□□□□□ -0.6
SNX6-203ENST00000555416 ITFG2Q969R8 447 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 ADAT3Q96EY9 351 aaPredicted RBP11.32□□□□□ -0.6
SNX6-203ENST00000555416 RDH12Q96NR8 316 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 GAFA1Q96PS6 74 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 C19orf24Q9BVV8 132 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 ESM1Q9NQ30 184 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 TRIM36Q9NQ86 728 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 MRPS18AQ9NVS2 196 aaKnown RBP11.32□□□□□ -0.6
SNX6-203ENST00000555416 ERVK13-1Q9NX77 482 aa11.32□□□□□ -0.6
SNX6-203ENST00000555416 NKX1-2Q9UD57 310 aaPredicted RBP11.32□□□□□ -0.6
SNX6-203ENST00000555416 OR4C45A6NMZ5 311 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 DHRS7CA6NNS2 312 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 MPZL2O60487 215 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 SFTPBP07988 381 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 GNAO1P09471 354 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 HAAOP46952 286 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 NPY4RP50391 375 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 IKZF1Q13422 519 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 DGUOKQ16854 277 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 ARMCX4Q5H9R4 360 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 OGFRL1Q5TC84 451 aaPredicted RBP11.31□□□□□ -0.6
SNX6-203ENST00000555416 ZNF691Q5VV52 312 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 BTNL3Q6UXE8 466 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 ZNF788Q6ZQV5 615 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 RNF144BQ7Z419 303 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 KCTD20Q7Z5Y7 419 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 ZNF555Q8NEP9 628 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 OR51A4Q8NGJ6 313 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 CYGBQ8WWM9 190 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 ST8SIA4Q92187 359 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 UPRTQ96BW1 309 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 C12orf43Q96C57 262 aaKnown RBP11.31□□□□□ -0.6
SNX6-203ENST00000555416 ZNF48Q96MX3 618 aaPredicted RBP11.31□□□□□ -0.6
SNX6-203ENST00000555416 ALG8Q9BVK2 526 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 DNAJB11Q9UBS4 358 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 ZNF222Q9UK12 451 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 NUP50Q9UKX7 468 aa11.31□□□□□ -0.6
SNX6-203ENST00000555416 TRAV40A0A0B4J280 105 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 IGKV1-9A0A0C4DH69 117 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 FAM230AA0A1W2PPH8 454 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 ANKRD61A6NGH8 418 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 OR2AT4A6NND4 320 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 J3QT63 122 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 CASQ2O14958 399 aaPredicted RBP11.3□□□□□ -0.6
SNX6-203ENST00000555416 ENSAO43768 121 aaKnown RBP11.3□□□□□ -0.6
SNX6-203ENST00000555416 LIMS3P0CW19 117 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 LIMS4P0CW20 117 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 PSG2P11465 335 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 MMP9P14780 707 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 GLRA1P23415 457 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 RAB40BQ12829 278 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 LAIR2Q6ISS4 152 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 PACRGLQ8N7B6 248 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 POC1AQ8NBT0 407 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 Q96MT0 163 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 TBX15Q96SF7 602 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 SIRPDQ9H106 197 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 ELL3Q9HB65 397 aaPredicted RBP11.3□□□□□ -0.6
SNX6-203ENST00000555416 NLKQ9UBE8 527 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms