RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 NSG2Q9Y328 171 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 CBY1Q9Y3M2 126 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 OR2T8A6NH00 312 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 BTG2P78543 158 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 TNFAIP6P98066 277 aaPredicted RBP6.21□□□□□ -1.42
SYNE2-216ENST00000555002 RPL18Q07020 188 aaKnown RBP6.21□□□□□ -1.42
SYNE2-216ENST00000555002 TMEM88Q6PEY1 159 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 ANKRD53Q8N9V6 530 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 SGK494Q96LW2 274 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 SORT1Q99523 831 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 HLA-GP17693 338 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 SLC35D3Q5M8T2 416 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 FAM109BQ6ICB4 259 aaPredicted RBP6.21□□□□□ -1.42
SYNE2-216ENST00000555002 OR2A2Q6IF42 318 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 DHRS13Q6UX07 377 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 KLHDC8BQ8IXV7 354 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 SLC26A10Q8NG04 563 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 RFESDQ8TAC1 157 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 SLC25A21Q9BQT8 299 aaPredicted RBP6.21□□□□□ -1.42
SYNE2-216ENST00000555002 OR2J1Q9GZK6 312 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 TBC1D29Q9UFV1 150 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 ZNF256Q9Y2P7 627 aaPredicted RBP6.21□□□□□ -1.42
SYNE2-216ENST00000555002 EIF4E2O60573 245 aaKnown RBP6.21□□□□□ -1.42
SYNE2-216ENST00000555002 COL1A1P02452 1464 aaPredicted RBP6.21□□□□□ -1.42
SYNE2-216ENST00000555002 SPI1P17947 270 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 ELFN2Q5R3F8 820 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 ZNF561Q8N587 486 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 CHST2Q9Y4C5 530 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 HS3ST3A1Q9Y663 406 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 STAG3L2P0CL84 134 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 POU3F3P20264 500 aaPredicted RBP6.21□□□□□ -1.42
SYNE2-216ENST00000555002 LRRC29Q8WV35 223 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 MOGAT1Q96PD6 335 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 TMPRSS13Q9BYE2 586 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 NAA50Q9GZZ1 169 aaKnown RBP6.21□□□□□ -1.42
SYNE2-216ENST00000555002 SRD5A3Q9H8P0 318 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 LIMS3P0CW19 117 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 LIMS4P0CW20 117 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 BCL3P20749 454 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 CAMPP49913 170 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 LIMK1P53667 647 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 RELAQ04206 551 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 SMAD4Q13485 552 aaKnown RBP6.2□□□□□ -1.42
SYNE2-216ENST00000555002 LILRA3Q8N6C8 439 aaPredicted RBP6.2□□□□□ -1.42
SYNE2-216ENST00000555002 DOT1LQ8TEK3 1739 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 ADRB1P08588 477 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 TCL1AP56279 114 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 ETV3LQ6ZN32 361 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 OR52N4Q8NGI2 321 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 OR2V1Q8NHB1 315 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 MARCH1Q8TCQ1 289 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 SPACA9Q96E40 222 aaPredicted RBP6.2□□□□□ -1.42
SYNE2-216ENST00000555002 CXorf58Q96LI9 332 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 HAPLN2Q9GZV7 340 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 GIPP09681 153 aaPredicted RBP6.2□□□□□ -1.42
SYNE2-216ENST00000555002 PRSS12P56730 875 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 KLF3P57682 345 aaPredicted RBP6.2□□□□□ -1.42
SYNE2-216ENST00000555002 FOXF1Q12946 379 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 KLHDC1Q8N7A1 406 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 OR1F12Q8NHA8 337 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 DYNC2LI1Q8TCX1 351 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 NEIL1Q96FI4 390 aaPredicted RBP6.2□□□□□ -1.42
SYNE2-216ENST00000555002 SYNGR2O43760 224 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 BSGP35613 385 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 SPCS3P61009 180 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 PRO1933Q9H354 126 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 NALCNQ8IZF0 1738 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 TTRP02766 147 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 HIST1H1CP16403 213 aaKnown RBP6.2□□□□□ -1.42
SYNE2-216ENST00000555002 GCSAMLQ5JQS6 135 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 TCTN3Q6NUS6 607 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 ZNF485Q8NCK3 441 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 ADPRHL1Q8NDY3 354 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 TMEM37Q8WXS4 190 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 UBE2FQ969M7 185 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 DIMT1Q9UNQ2 313 aaKnown RBP6.2□□□□□ -1.42
SYNE2-216ENST00000555002 JTBO76095 146 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 ALDOCP09972 364 aaKnown RBP6.2□□□□□ -1.42
SYNE2-216ENST00000555002 CR2P20023 1033 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 ID1P41134 155 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 KIR2DS2P43631 304 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 SELENBP1Q13228 472 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 SLCO4C1Q6ZQN7 724 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 UQCC2Q9BRT2 126 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 LPAR5Q9H1C0 372 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 IL21Q9HBE4 155 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 M0R2Z0 102 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 NID1P14543 1247 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 ATP6V1FQ16864 119 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 UBE2ZQ9H832 354 aaPredicted RBP6.2□□□□□ -1.42
SYNE2-216ENST00000555002 TMSB15BA0A087X1C1 80 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 LOC389332A0A1B0GUA5 103 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 HRASP01112 189 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 CD82P27701 267 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 TEAD1P28347 426 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 CHRNA7P36544 502 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 TIPARPQ7Z3E1 657 aaKnown RBP6.2□□□□□ -1.42
SYNE2-216ENST00000555002 OR8B3Q8NGG8 313 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 APOBEC3DQ96AK3 386 aaPredicted RBP6.2□□□□□ -1.42
SYNE2-216ENST00000555002 OR8B2Q96RD0 313 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms