RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	RIN1	Q13671	783 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	OR8B8	Q15620	311 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	ZNF829	Q3KNS6	432 aa	Predicted RBP	3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	TP53I3	Q53FA7	332 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	KLHL22	Q53GT1	634 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	TMEM255A	Q5JRV8	349 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	BCL2L15	Q5TBC7	163 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	AADACL4	Q5VUY2	407 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	PRAMEF6	Q5VXH4	476 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	SFRP4	Q6FHJ7	346 aa	Predicted RBP	3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	C11orf87	Q6NUJ2	197 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	FAHD2B	Q6P2I3	314 aa	Predicted RBP	3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	FBXW12	Q6X9E4	464 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994		Q6ZRM9	215 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	LHFPL2	Q6ZUX7	228 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	FAM220A	Q7Z4H9	259 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	ZNF679	Q8IYX0	411 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	OR56B2P	Q8NGI1	322 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	OR52H1	Q8NGJ2	320 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	OR2T27	Q8NH04	317 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	OR51E1	Q8TCB6	317 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	ZFAND2B	Q8WV99	257 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	RNF133	Q8WVZ7	376 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	TRUB1	Q8WWH5	349 aa	Known RBP	3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	MSI2	Q96DH6	328 aa	Known RBP	3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	FAHD2A	Q96GK7	314 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	RNF170	Q96K19	258 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	MBOAT4	Q96T53	435 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	GAL3ST1	Q99999	423 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	PAPOLG	Q9BWT3	736 aa	Known RBP	3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	GABARAPL3	Q9BY60	117 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	PBOV1	Q9GZY1	135 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	VCX	Q9H320	206 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	DCLRE1B	Q9H816	532 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	NIPAL2	Q9H841	368 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	MARCH7	Q9H992	704 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	ADGRL4	Q9HBW9	690 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	SMURF1	Q9HCE7	757 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	C14orf119	Q9NWQ9	140 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	C1orf123	Q9NWV4	160 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	SMPD3	Q9NY59	655 aa	Predicted RBP	3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	USE1	Q9NZ43	259 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	IL19	Q9UHD0	177 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	ATPIF1	Q9UII2	106 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	COPS3	Q9UNS2	423 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	PIGL	Q9Y2B2	252 aa		3.91	□□□□□ -1.78
ATXN3-231	ENST00000554994	RYR1	P21817	5038 aa		3.9	□□□□□ -1.78
ATXN3-231	ENST00000554994	NOTCH3	Q9UM47	2321 aa		3.9	□□□□□ -1.78
ATXN3-231	ENST00000554994	PPIAL4E	A0A075B759	164 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	IGHV3OR15-7	A0A075B7D8	119 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994		A0A1B0GVI7	797 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	FAM230A	A0A1W2PPH8	454 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	ANXA2P2	A6NMY6	339 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	VGLL3	A8MV65	326 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	VWC2L	B2RUY7	222 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	PPIAL4D	F5H284	164 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994		H3BSA7	217 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	MLNR	O43193	412 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	MPZL2	O60487	215 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	GMDS	O60547	372 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	ZNF254	O75437	659 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	MTRF1	O75570	445 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	AMY2A	P04746	511 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	HTR1A	P08908	422 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	PPIAL4F	P0DN26	164 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	AMY2B	P19961	511 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	ANOS1	P23352	680 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	CFL1	P23528	166 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	GIF	P27352	417 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	PEX2	P28328	305 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	DDOST	P39656	456 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	OPRL1	P41146	370 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	SNRPG	P62308	76 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	IL13RA1	P78552	427 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	LCN2	P80188	198 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	EFNB1	P98172	346 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	FAM3A	P98173	230 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	SLC34A1	Q06495	639 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	RIPPLY1	Q0D2K3	151 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	PRDX4	Q13162	271 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	MPPED2	Q15777	294 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	PCK2	Q16822	640 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	CEP78	Q5JTW2	689 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	FAM201A	Q5SY85	155 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	MEDAG	Q5VYS4	303 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	TTC23	Q5W5X9	447 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	CCBE1	Q6UXH8	406 aa	Predicted RBP	3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	COLCA1	Q6ZS62	124 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	ZNF826P	Q6ZT77	177 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	SSX6	Q7RTT6	188 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	C1orf87	Q8N0U7	546 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	FTMT	Q8N4E7	242 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	CSNK2A3	Q8NEV1	391 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	OR5T2	Q8NGG2	359 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	OR8B12	Q8NGG6	310 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	CLDND2	Q8NHS1	167 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	CNIH3	Q8TBE1	160 aa		3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	TRMT10A	Q8TBZ6	339 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-231	ENST00000554994	NPRL2	Q8WTW4	380 aa		3.9	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms