RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 TECTBQ96PL2 329 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 TP53TG5Q9Y2B4 290 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 ZFHX2Q9C0A1 2572 aaPredicted RBP7.67□□□□□ -1.18
TDP1-210ENST00000554976 ZNF816-ZNF321PA0A0X1KG74 233 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 C5orf49A4QMS7 147 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 INMT-MINDY4F8WBC2 141 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 J3QW42 95 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 SOCS1O15524 211 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 SCGNO76038 276 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 NDUFB6O95139 128 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 CELA3BP08861 270 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 SDHBP21912 280 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 ERP29P30040 261 aaKnown RBP7.67□□□□□ -1.18
TDP1-210ENST00000554976 INPP1P49441 399 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 AP3S2P59780 193 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 OR2A2Q6IF42 318 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 LHFPL2Q6ZUX7 228 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 RPRMLQ8N4K4 120 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 ST8SIA4Q92187 359 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 Q96M66 194 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 TRAF4Q9BUZ4 470 aaPredicted RBP7.67□□□□□ -1.18
TDP1-210ENST00000554976 NPDC1Q9NQX5 325 aaPredicted RBP7.67□□□□□ -1.18
TDP1-210ENST00000554976 STARD10Q9Y365 291 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 CNN3Q15417 329 aaKnown RBP7.66□□□□□ -1.18
TDP1-210ENST00000554976 SLC36A1Q7Z2H8 476 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 P4HA3Q7Z4N8 544 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 CCDC36Q8IYA8 594 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 CACNG6Q9BXT2 260 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 PPA2Q9H2U2 334 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 ZNF71Q9NQZ8 489 aaPredicted RBP7.66□□□□□ -1.18
TDP1-210ENST00000554976 NUDT15Q9NV35 164 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 TAS2R8Q9NYW2 309 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 MYO7BQ6PIF6 2116 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 TRAV6A0A075B6T7 132 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 TMEM235A6NFC5 223 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 TSPAN4O14817 238 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 RBBP9O75884 186 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 NRASP01111 189 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 IGLV1-44P01699 117 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 CHRM2P08172 466 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 CD79AP11912 226 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 HIST1H1DP16402 221 aaKnown RBP7.66□□□□□ -1.18
TDP1-210ENST00000554976 CEACAM8P31997 349 aaPredicted RBP7.66□□□□□ -1.18
TDP1-210ENST00000554976 PCGF3Q3KNV8 242 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 FAM209BQ5JX69 171 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 METTL11BQ5VVY1 283 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 Q6ZTK2 550 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 FJX1Q86VR8 437 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 PXT1Q8NFP0 134 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 DMRTB1Q96MA1 342 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 SLC2A8Q9NY64 477 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 GPR160Q9UJ42 338 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 ZNF835Q9Y2P0 537 aa7.66□□□□□ -1.18
TDP1-210ENST00000554976 PRSS44E7EML9 344 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 SMPD2O60906 423 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 LILRA1O75019 489 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 WDR1O75083 606 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 CA11O75493 328 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 CD3DP04234 171 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 CRHP06850 196 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 TPOP07202 933 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 GNB3P16520 340 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 TIMP3P35625 211 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 VEGFCP49767 419 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 FUT6P51993 359 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 RRAS2P62070 204 aaPredicted RBP7.65□□□□□ -1.18
TDP1-210ENST00000554976 HLXQ14774 488 aaPredicted RBP7.65□□□□□ -1.18
TDP1-210ENST00000554976 ST3GAL2Q16842 350 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 CDNFQ49AH0 187 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 SLC22A6Q4U2R8 563 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 TCTE3Q8IZS6 198 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 SLC30A7Q8NEW0 376 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 OR56B4Q8NH76 319 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 FAM57AQ8TBR7 257 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 NPRL2Q8WTW4 380 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 TMEM59Q9BXS4 323 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 BANF2Q9H503 90 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 OPA3Q9H6K4 179 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 A0A1B0GWJ7 208 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 METTL21EPA6NDL7 271 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 MEIS3P1A6NDR6 274 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 CRYABP02511 175 aaKnown RBP7.65□□□□□ -1.18
TDP1-210ENST00000554976 HOXD4P09016 255 aaPredicted RBP7.65□□□□□ -1.18
TDP1-210ENST00000554976 GSTP1P09211 210 aaKnown RBP7.65□□□□□ -1.18
TDP1-210ENST00000554976 AKAIN1P0CW23 69 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 ZNF35P13682 527 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 MGMTP16455 207 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 PSMB1P20618 241 aaKnown RBP7.65□□□□□ -1.18
TDP1-210ENST00000554976 PNLIPRP3Q17RR3 467 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 KRTCAP3Q53RY4 240 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 C1orf185Q5T7R7 199 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 FBXW12Q6X9E4 464 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 C17orf78Q8N4C9 275 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 OR5D18Q8NGL1 313 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 NANOS1Q8WY41 292 aaKnown RBP7.65□□□□□ -1.18
TDP1-210ENST00000554976 FBXW5Q969U6 566 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 OCSTAMPQ9BR26 566 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 ZMAT3Q9HA38 289 aaKnown RBP7.65□□□□□ -1.18
TDP1-210ENST00000554976 PTTG3PQ9NZH4 202 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 ZNF581Q9P0T4 197 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms