RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 SNAI3Q3KNW1 292 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 DNAL1Q4LDG9 190 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 TMEM155Q4W5P6 130 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 FAM98BQ52LJ0 330 aaKnown RBP3.46□□□□□ -1.86
VTI1B-203ENST00000554636 TEX30Q5JUR7 227 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 GLYATL3Q5SZD4 288 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 DCAF12L2Q5VW00 463 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 LIN54Q6MZP7 749 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 ACSM5Q6NUN0 579 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF771Q7L3S4 317 aaPredicted RBP3.46□□□□□ -1.86
VTI1B-203ENST00000554636 NAA40Q86UY6 237 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 HS3ST5Q8IZT8 346 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 PAPD5Q8NDF8 572 aaKnown RBP3.46□□□□□ -1.86
VTI1B-203ENST00000554636 PROKR2Q8NFJ6 384 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 OR2T33Q8NG76 320 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 OR8G5Q8NG78 346 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 OR2Z1Q8NG97 314 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 OR10AD1Q8NGE0 317 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 OR5L1Q8NGL2 311 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 OR2AJ1Q8NGZ0 328 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 OR2T4Q8NH00 348 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF420Q8TAQ5 688 aaPredicted RBP3.46□□□□□ -1.86
VTI1B-203ENST00000554636 ST7LQ8TDW4 575 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 GIPC3Q8TF64 312 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 CANT1Q8WVQ1 401 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 TMEM158Q8WZ71 300 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 CCL17Q92583 94 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 RAB1CQ92928 201 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 POP5Q969H6 163 aaKnown RBP3.46□□□□□ -1.86
VTI1B-203ENST00000554636 SLCO4A1Q96BD0 722 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF799Q96GE5 643 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 TIMD4Q96H15 378 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 OR2V2Q96R30 315 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 PITX2Q99697 317 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 ATF6BQ99941 703 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 GAL3ST1Q99999 423 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 CHID1Q9BWS9 393 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 HCAR1Q9BXC0 346 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 METTL17Q9H7H0 456 aaPredicted RBP3.46□□□□□ -1.86
VTI1B-203ENST00000554636 WDR76Q9H967 626 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 MARCH7Q9H992 704 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 PATZ1Q9HBE1 687 aaKnown RBP3.46□□□□□ -1.86
VTI1B-203ENST00000554636 CMC2Q9NRP2 79 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 PDP1Q9P0J1 537 aaPredicted RBP3.46□□□□□ -1.86
VTI1B-203ENST00000554636 IL19Q9UHD0 177 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 POMPQ9Y244 141 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 PPIAL4EA0A075B759 164 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 LOC105371242A0A075B767 164 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 PPIAL4CA0A0B4J2A2 164 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 A0A0G2JMP0 313 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 A0A0X1KG70 313 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 hCG_38984A0A1B0GV85 526 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 GAGE12JA6NER3 117 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 CCDC182A6NF36 153 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 FAM183AA6NL82 134 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 RIIAD1A6NNX1 92 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 CD300LBA8K4G0 201 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 CEACAM18A8MTB9 384 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF878C9JN71 531 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 PPIAL4DF5H284 164 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 F5H5P2 479 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 TMEM178BH3BS89 294 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 J3QLI3 93 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 IFNL4K9M1U5 179 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 SURF4O15260 269 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 TCF21O43680 179 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 SELENOFO60613 162 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 FKBP6O75344 327 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 FOXH1O75593 365 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 GLCEO94923 617 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 VENTXO95231 258 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 PTBP3O95758 552 aaKnown RBP3.45□□□□□ -1.86
VTI1B-203ENST00000554636 CYB5R3P00387 301 aaPredicted RBP3.45□□□□□ -1.86
VTI1B-203ENST00000554636 CST1P01037 141 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 IFNGP01579 166 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 LCATP04180 440 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 HLA-DPB1P04440 258 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 PPIAL4FP0DN26 164 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 SLC2A1P11166 492 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 ARSBP15848 533 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF12P17014 697 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 SLC2A5P22732 501 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 CD200P41217 278 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 SRP9P49458 86 aaKnown RBP3.45□□□□□ -1.86
VTI1B-203ENST00000554636 SEC61A1P61619 476 aaKnown RBP3.45□□□□□ -1.86
VTI1B-203ENST00000554636 BTG1P62324 171 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 CBX1P83916 185 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 PAX2Q02962 417 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF92Q03936 586 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 BNIP1Q12981 228 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 MAB21L1Q13394 359 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 FLOT2Q14254 428 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF181Q2M3W8 571 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 KLHL12Q53G59 568 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 FAM201AQ5SY85 155 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 PRAMEF6Q5VXH4 476 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 SLC27A4Q6P1M0 643 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 SHQ1Q6PI26 577 aaKnown RBP3.45□□□□□ -1.86
VTI1B-203ENST00000554636 DRAM2Q6UX65 266 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 PRSS45Q7RTY3 260 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms