RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 IGHV4-31P0DP07 118 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 ZNF16P17020 682 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-214ENST00000554604 ADRA2CP18825 462 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 FSTP19883 344 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 MSR1P21757 451 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 GIFP27352 417 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 RANBP1P43487 201 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 INPP1P49441 399 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 ALKBH6Q3KRA9 238 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 CHRFAM7AQ494W8 412 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 HES5Q5TA89 166 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 TMEM244Q5VVB8 128 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 SPATC1Q76KD6 591 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-214ENST00000554604 RDH10Q8IZV5 341 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 CELF2-AS1Q8N7Q2 184 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 CPEB3Q8NE35 698 aaKnown RBP10.61□□□□□ -0.71
SHMT2-214ENST00000554604 OR1J1Q8NGS3 322 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 OR2AJ1Q8NGZ0 328 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 AKR7LQ8NHP1 331 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 RAB40AQ8WXH6 277 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 TRIM63Q969Q1 353 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 RFT1Q96AA3 541 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 SLAMF6Q96DU3 332 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 NEDD4LQ96PU5 975 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 ABCG5Q9H222 651 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 NIPAL2Q9H841 368 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 TAAR3PQ9P1P4 343 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 MYEF2Q9P2K5 600 aaKnown RBP10.61□□□□□ -0.71
SHMT2-214ENST00000554604 OR52A1Q9UKL2 312 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 HHLA2Q9UM44 414 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 DHDHQ9UQ10 334 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 TIMM10BQ9Y5J6 103 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 WNK2Q9Y3S1 2297 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 TRAV8-7A0A075B6U6 113 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 A0A0B4J203 849 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 LOC100289279A0A1B0GTE1 492 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 ANXA2P2A6NMY6 339 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 ZNF878C9JN71 531 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 LYNX1G3V0Z9 82 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 LYRM1O43325 122 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 GSTZ1O43708 216 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-214ENST00000554604 ANXA2P07355 339 aaKnown RBP10.6□□□□□ -0.71
SHMT2-214ENST00000554604 UBCP0CG48 685 aaKnown RBP10.6□□□□□ -0.71
SHMT2-214ENST00000554604 LYNX1P0DP58 116 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 CD37P11049 281 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 NAT2P11245 290 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 ZNF250P15622 560 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 IGFBP3P17936 291 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-214ENST00000554604 MNDAP41218 407 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 MMP15P51511 669 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 ERVS71-1P61550 626 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 LSM6P62312 80 aaKnown RBP10.6□□□□□ -0.71
SHMT2-214ENST00000554604 PSG4Q00888 419 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 MADCAM1Q13477 382 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 FAM166AQ6J272 317 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 DUSP18Q8NEJ0 188 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 OR51A4Q8NGJ6 313 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 ABHD1Q96SE0 405 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 THAP7Q9BT49 309 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-214ENST00000554604 OR2H1Q9GZK4 316 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 MOB1AQ9H8S9 216 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 CENPMQ9NSP4 180 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 RBFOX1Q9NWB1 397 aaKnown RBP10.6□□□□□ -0.71
SHMT2-214ENST00000554604 FAM206AQ9NX38 181 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 CDC42EP3Q9UKI2 254 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 GTF2A1LQ9UNN4 478 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 LHFPL6Q9Y693 200 aa10.6□□□□□ -0.71
SHMT2-214ENST00000554604 LOC100509620A0A075B734 347 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 LINC00854A0A1B0GVQ3 168 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 TMEM269A0A1B0GVZ9 245 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 LRP5LA4QPB2 252 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 KIAA1324LA8MWY0 1029 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-214ENST00000554604 BOLA2-SMG1P6H3BVE0 249 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 SULT1B1O43704 296 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 LMX1BO60663 402 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 IFNA2P01563 188 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 HPXP02790 462 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 GCH1P30793 250 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 PSMA6P60900 246 aaKnown RBP10.59□□□□□ -0.71
SHMT2-214ENST00000554604 ZNF718Q3SXZ3 478 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 BCL2L15Q5TBC7 163 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 ZNF774Q6NX45 483 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 CORO6Q6QEF8 472 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 ELMOD2Q8IZ81 293 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 CMTM4Q8IZR5 234 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 OR10S1Q8NGN2 331 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 ENKURQ8TC29 256 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 C15orf40Q8WUR7 153 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 RDH5Q92781 318 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 MSI2Q96DH6 328 aaKnown RBP10.59□□□□□ -0.71
SHMT2-214ENST00000554604 SLC25A38Q96DW6 304 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 POM121L2Q96KW2 1035 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 ZNF416Q9BWM5 594 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 BEX2Q9BXY8 128 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 SHARPINQ9H0F6 387 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 HDHD2Q9H0R4 259 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 WNT5BQ9H1J7 359 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 CHODLQ9H9P2 273 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 LIN7BQ9HAP6 207 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms