RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 FAM222BQ8WU58 562 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 TMIGD2Q96BF3 282 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 PGAM5Q96HS1 289 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 LYZL4Q96KX0 146 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 PGLYRP3Q96LB9 341 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 MGLLQ99685 303 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 PBOV1Q9GZY1 135 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 OR51B6Q9H340 312 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 NUFIP1Q9UHK0 495 aaKnown RBP5.38□□□□□ -1.55
SCFD1-212ENST00000554486 STARD10Q9Y365 291 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 UBE2J1Q9Y385 318 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-212ENST00000554486 N6AMT1Q9Y5N5 214 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 CELSR2Q9HCU4 2923 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 AKAP6Q13023 2319 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 PTPN13Q12923 2485 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 TRBV2A0A0J9YWF9 115 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 A0A0U1RQV5 110 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 A0A1B0GTI1 187 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-212ENST00000554486 FAM90A20PA6NIJ5 464 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 TMEM212A6NML5 194 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 SHISA9B4DS77 424 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 PRSS44E7EML9 344 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 ATP6V1G2-DDX39BF2Z307 99 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 P2RY10O00398 339 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 ABCD4O14678 606 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 PLPP2O43688 288 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 GPRIN2O60269 458 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 SMPD2O60906 423 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 PLAUP00749 431 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 CELP19835 753 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 THBS4P35443 961 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 TGFBR2P37173 567 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 PEX19P40855 299 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 RGS6P49758 472 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 NR1H2P55055 460 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 UCP2P55851 309 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 ERVS71-1P61550 626 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 PPP1CBP62140 327 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 RPS11P62280 158 aaKnown RBP eCLIP5.37□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF92Q03936 586 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 TNK1Q13470 666 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 GPR50Q13585 617 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 BEX5Q5H9J7 111 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 TMEM255AQ5JRV8 349 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 GLYATL3Q5SZD4 288 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 BCL2L15Q5TBC7 163 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 LIPKQ5VXJ0 399 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF782Q6ZMW2 699 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-212ENST00000554486 MEX3BQ6ZN04 569 aaKnown RBP5.37□□□□□ -1.55
SCFD1-212ENST00000554486 RDH10Q8IZV5 341 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 OR52H1Q8NGJ2 320 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 OR51A4Q8NGJ6 313 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 OR13F1Q8NGS4 319 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 OR13C5Q8NGS8 318 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 OR10AC1Q8NH08 325 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 OR2AE1Q8NHA4 323 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 OR51E1Q8TCB6 317 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 RGP1Q92546 391 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-212ENST00000554486 GHSRQ92847 366 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 APOBEC3DQ96AK3 386 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-212ENST00000554486 SGK3Q96BR1 496 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 SMIM19Q96E16 107 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 YIPF6Q96EC8 236 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 PDCD1LG2Q9BQ51 273 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 TMEM204Q9BSN7 226 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 MOB1AQ9H8S9 216 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 VCX3AQ9NNX9 186 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 NGBQ9NPG2 151 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 PTTG3PQ9NZH4 202 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 EIF3KQ9UBQ5 218 aaKnown RBP5.37□□□□□ -1.55
SCFD1-212ENST00000554486 GTF2A1LQ9UNN4 478 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 ARFGEF3Q5TH69 2177 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 TACC2O95359 2948 aa5.37□□□□□ -1.55
SCFD1-212ENST00000554486 hCG_38984A0A1B0GV85 526 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 LOC107986453A0A1B0GWG9 222 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 H3BSH0 61 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 CASKO14936 926 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 LMX1BO60663 402 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 CRYAAP02489 173 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 ISG15P05161 165 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 CD53P19397 219 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 CCL1P22362 96 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 MPV17P39210 176 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 MAGEB1P43366 347 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 RPL5P46777 297 aaKnown RBP5.36□□□□□ -1.55
SCFD1-212ENST00000554486 RPS25P62851 125 aaKnown RBP5.36□□□□□ -1.55
SCFD1-212ENST00000554486 SNTB2Q13425 540 aaKnown RBP5.36□□□□□ -1.55
SCFD1-212ENST00000554486 INSL4Q14641 139 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 DAZAP2Q15038 168 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-212ENST00000554486 ODF4Q2M2E3 257 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 SPATA46Q5T0L3 261 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 ATPAF1Q5TC12 328 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-212ENST00000554486 ADAM5Q6NVV9 412 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF544Q6NX49 715 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 FBXW12Q6X9E4 464 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF66Q6ZN08 573 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF704Q6ZNC4 412 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-212ENST00000554486 Q6ZSR3 168 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF676Q8N7Q3 588 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms