RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 ANGPTL6Q8NI99 470 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 TMEM163Q8TC26 289 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 THEM6Q8WUY1 208 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 HPSE2Q8WWQ2 592 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 LHX4Q969G2 390 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 OTULINQ96BN8 352 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 KCTD12Q96CX2 325 aaKnown RBP5.44□□□□□ -1.54
SLIRP-203ENST00000554074 MED30Q96HR3 178 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 LYZL4Q96KX0 146 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 Q96MT0 163 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 MNTQ99583 582 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 CCL13Q99616 98 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 CITED1Q99966 193 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 APOL4Q9BPW4 351 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 DCTN5Q9BTE1 182 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 DPAGT1Q9H3H5 408 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 IMPAD1Q9NX62 359 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 DNAJC27Q9NZQ0 273 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 RRP15Q9Y3B9 282 aaKnown RBP5.44□□□□□ -1.54
SLIRP-203ENST00000554074 LRP12Q9Y561 859 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 NOTCH1P46531 2555 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 PLXNB1O43157 2135 aa5.44□□□□□ -1.54
SLIRP-203ENST00000554074 A0A0U1RQK1 487 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 ZNF816-ZNF321PA0A0X1KG74 233 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 LOC100130705A0A1B0GUX0 176 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 A0A1B0GW55 424 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 OR5B21A6NL26 309 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 ZNF850A8MQ14 1090 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 M0R1W7 72 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 SIGLEC5O15389 551 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 GPR137BO60478 399 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 MITFO75030 526 aaPredicted RBP5.43□□□□□ -1.54
SLIRP-203ENST00000554074 ATP6V1G2O95670 118 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 ACAA1P09110 424 aaPredicted RBP5.43□□□□□ -1.54
SLIRP-203ENST00000554074 FBP1P09467 338 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 DUX4L2P0CJ85 424 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 DUX4L3P0CJ86 424 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 DUX4L4P0CJ87 422 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 DUX4L5P0CJ88 424 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 DUX4L6P0CJ89 424 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 DUX4L7P0CJ90 424 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 OMGP23515 440 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 EEF1B2P24534 225 aaKnown RBP5.43□□□□□ -1.54
SLIRP-203ENST00000554074 MAP2K3P46734 347 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 GNG3P63215 75 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 GFOD2Q3B7J2 385 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 CEACAM21Q3KPI0 293 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 KIAA2026Q5HYC2 2103 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 LPCAT4Q643R3 524 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 NCR3LG1Q68D85 454 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 DUX4L9Q6RFH8 374 aaPredicted RBP5.43□□□□□ -1.54
SLIRP-203ENST00000554074 GDPGP1Q6ZNW5 385 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 C17orf107Q6ZR85 190 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 KRT77Q7Z794 578 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 CPOQ8IVL8 374 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 DHRSXQ8N5I4 330 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 ZSCAN4Q8NAM6 433 aaPredicted RBP5.43□□□□□ -1.54
SLIRP-203ENST00000554074 OR5A2Q8NGI9 324 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 ZNF671Q8TAW3 534 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 ASB17Q8WXJ9 295 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 TNFRSF14Q92956 283 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 RNF170Q96K19 258 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 GAFA1Q96PS6 74 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 HIST1H2AAQ96QV6 131 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 SLC29A1Q99808 456 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 MROQ9BYG7 248 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 FGF23Q9GZV9 251 aaPredicted RBP5.43□□□□□ -1.54
SLIRP-203ENST00000554074 OR51I2Q9H344 312 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 RIBC2Q9H4K1 309 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 C16orf95Q9H693 158 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 PPP1R3EQ9H7J1 279 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 METTL8Q9H825 291 aaKnown RBP5.43□□□□□ -1.54
SLIRP-203ENST00000554074 BRD7Q9NPI1 651 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 FAM118AQ9NWS6 357 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 FAM206AQ9NX38 181 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 RASL12Q9NYN1 266 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 TVP23BQ9NYZ1 205 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 ZNRD1Q9P1U0 126 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 NLKQ9UBE8 527 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 DNAJB11Q9UBS4 358 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 DUX4Q9UBX2 424 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 SLC25A10Q9UBX3 287 aaPredicted RBP5.43□□□□□ -1.54
SLIRP-203ENST00000554074 WARS2Q9UGM6 360 aaKnown RBP5.43□□□□□ -1.54
SLIRP-203ENST00000554074 LAMP5Q9UJQ1 280 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.43□□□□□ -1.54
SLIRP-203ENST00000554074 KLHDC2Q9Y2U9 406 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 FAM96BQ9Y3D0 163 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 GMPPBQ9Y5P6 360 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 TMEM14AQ9Y6G1 99 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 TGP01266 2768 aa5.43□□□□□ -1.54
SLIRP-203ENST00000554074 TRBV23-1A0A0A0MS06 115 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 TMEM269A0A1B0GVZ9 245 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 IRGMA1A4Y4 181 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 BTBD17A6NE02 478 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 OR2AT4A6NND4 320 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 RNASEK-C17orf49H0YIS7 233 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 M0QZ24 198 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 TIMM23O14925 209 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 NPFFO15130 113 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 TSPAN9O75954 239 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms