RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 TOMM5Q8N4H5 51 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 C1orf162Q8NEQ5 155 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-209ENST00000553659 PHF21AQ96BD5 680 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 ORAI1Q96D31 301 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 SLC25A38Q96DW6 304 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 SORCS2Q96PQ0 1159 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 ABHD1Q96SE0 405 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 UQCC2Q9BRT2 126 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 RNF121Q9H920 327 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 TMEM38BQ9NVV0 291 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 UPB1Q9UBR1 384 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 AMDHD2Q9Y303 409 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 CACNG2Q9Y698 323 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 A0A0B4J203 849 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 A0A0U1RQV5 110 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 RER1O15258 196 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 FARS2O95363 451 aaKnown RBP13.74□□□□□ -0.21
ACTN1-209ENST00000553659 RAB3AP20336 220 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 DDOSTP39656 456 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 ZNF121P58317 390 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-209ENST00000553659 TGFBR3Q03167 851 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 FAM189A2Q15884 450 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 KRTAP24-1Q3LI83 254 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 PHYHD1Q5SRE7 291 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 C1orf100Q5SVJ3 147 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 ANKRD16Q6P6B7 361 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 LINGO2Q7L985 606 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 AKAP14Q86UN6 197 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 YIPF5Q969M3 257 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 CREB3L1Q96BA8 519 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 FAM3DQ96BQ1 224 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 PGAM5Q96HS1 289 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 TMEM138Q9NPI0 162 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 SLC7A10Q9NS82 523 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 ATPIF1Q9UII2 106 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 ZNF391Q9UJN7 358 aa13.74□□□□□ -0.21
ACTN1-209ENST00000553659 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.74□□□□□ -0.211e-12■■■□□ 16.3
ACTN1-209ENST00000553659 LINC00854A0A1B0GVQ3 168 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 XRCC3O43542 346 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 ORC5O43913 435 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 KRT33AO76009 404 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 ZNF16P17020 682 aaPredicted RBP13.73□□□□□ -0.21
ACTN1-209ENST00000553659 RAB6AP20340 208 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 OTX1P32242 354 aaPredicted RBP13.73□□□□□ -0.21
ACTN1-209ENST00000553659 GNALP38405 381 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 POU3F4P49335 361 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 GZMKP49863 264 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 SSBP1Q04837 148 aaKnown RBP13.73□□□□□ -0.21
ACTN1-209ENST00000553659 C9orf135Q5VTT2 229 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 DRAM2Q6UX65 266 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 SLC22A24Q8N4F4 322 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 DNAAF1Q8NEP3 725 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 OR8B12Q8NGG6 310 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 OR52H1Q8NGJ2 320 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 FCAMRQ8WWV6 532 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 ITFG2Q969R8 447 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 PPP1R14AQ96A00 147 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 FOXB1Q99853 325 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 DPAGT1Q9H3H5 408 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 CRLF2Q9HC73 371 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 NEK6Q9HC98 313 aa13.73□□□□□ -0.21
ACTN1-209ENST00000553659 MRPS7Q9Y2R9 242 aaKnown RBP13.73□□□□□ -0.21
ACTN1-209ENST00000553659 DHRS7CA6NNS2 312 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 VWC2LB2RUY7 222 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 RPL36A-HNRNPH2H7BZ11 118 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 MTRF1O75570 445 aaKnown RBP13.72□□□□□ -0.21
ACTN1-209ENST00000553659 LY6HO94772 140 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 SLC6A1P30531 599 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 PRKXP51817 358 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 TPTEP56180 551 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 CLDN12P56749 244 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 BTG1P62324 171 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 SWI5Q1ZZU3 235 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 MST1LQ2TV78 715 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 CCDC92Q53HC0 331 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-209ENST00000553659 TSPO2Q5TGU0 170 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 ZNF529Q6P280 563 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 ABHD12BQ7Z5M8 362 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-209ENST00000553659 CELF2-AS1Q8N7Q2 184 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 OR1M1Q8NGA1 313 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 FGGYQ96C11 551 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 OR10A2Q9H208 303 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 METTL17Q9H7H0 456 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-209ENST00000553659 GPR35Q9HC97 309 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 PLEK2Q9NYT0 353 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 TAS2R8Q9NYW2 309 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 TIMM10BQ9Y5J6 103 aa13.72□□□□□ -0.21
ACTN1-209ENST00000553659 A0A1B0GTI1 187 aa13.71□□□□□ -0.21
ACTN1-209ENST00000553659 ATP6V1G2-DDX39BF2Z307 99 aa13.71□□□□□ -0.21
ACTN1-209ENST00000553659 M0R135 149 aa13.71□□□□□ -0.21
ACTN1-209ENST00000553659 NDUFS8O00217 210 aa13.71□□□□□ -0.21
ACTN1-209ENST00000553659 SULT1C2O00338 296 aa13.71□□□□□ -0.21
ACTN1-209ENST00000553659 SGCEO43556 437 aa13.71□□□□□ -0.21
ACTN1-209ENST00000553659 ALX3O95076 343 aa13.71□□□□□ -0.21
ACTN1-209ENST00000553659 IGLV3-1P01715 115 aa13.71□□□□□ -0.21
ACTN1-209ENST00000553659 ALDOBP05062 364 aa13.71□□□□□ -0.21
ACTN1-209ENST00000553659 FAM157BP0CG42 384 aa13.71□□□□□ -0.21
ACTN1-209ENST00000553659 ARSBP15848 533 aa13.71□□□□□ -0.21
ACTN1-209ENST00000553659 SRD5A1P18405 259 aa13.71□□□□□ -0.21
ACTN1-209ENST00000553659 MPGP29372 298 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms