RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 SFRP4Q6FHJ7 346 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-221ENST00000553498 FAHD2BQ6P2I3 314 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-221ENST00000553498 INO80CQ6PI98 192 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-221ENST00000553498 Q6ZS92 163 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 Q6ZT83 130 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 MRPL21Q7Z2W9 205 aaKnown RBP6.33□□□□□ -1.4
ATXN3-221ENST00000553498 TRAPPC6BQ86SZ2 158 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 FJX1Q86VR8 437 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 TMEM17Q86X19 198 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 ZDHHC22Q8N966 263 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 ACBD4Q8NC06 268 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 CPEB3Q8NE35 698 aaKnown RBP6.33□□□□□ -1.4
ATXN3-221ENST00000553498 Q8NFD4 153 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 OR4C16Q8NGL9 310 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 BCL2L2Q92843 193 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-221ENST00000553498 GCDHQ92947 438 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-221ENST00000553498 FAHD2AQ96GK7 314 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 ZNF486Q96H40 463 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-221ENST00000553498 EAF1Q96JC9 268 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-221ENST00000553498 RADILQ96JH8 1075 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 POM121L2Q96KW2 1035 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 KRTAP4-12Q9BQ66 201 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 GINS4Q9BRT9 223 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 RANGRFQ9HD47 186 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-221ENST00000553498 IFT46Q9NQC8 304 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 B3GNT2Q9NY97 397 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 MPC1Q9Y5U8 109 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 NPTNQ9Y639 398 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 SCN2AQ99250 2005 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 DMDP11532 3685 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 C5orf49A4QMS7 147 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 TMEM235A6NFC5 223 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 FOXI3A8MTJ6 420 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-221ENST00000553498 MFNGO00587 321 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 RGS13O14921 159 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 ARPC1BO15143 372 aaKnown RBP6.32□□□□□ -1.4
ATXN3-221ENST00000553498 WDR1O75083 606 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 RGS11O94810 467 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 IL18BPO95998 194 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 IFNA6P05013 189 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 TMEM225BP0DP42 221 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 SELEP16581 610 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 C4BPBP20851 252 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 ACKR3P25106 362 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 ZP1P60852 638 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 UBE2MP61081 183 aaKnown RBP6.32□□□□□ -1.4
ATXN3-221ENST00000553498 UBE2NP61088 152 aaKnown RBP6.32□□□□□ -1.4
ATXN3-221ENST00000553498 CD83Q01151 205 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 ZNF92Q03936 586 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 HGFACQ04756 655 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 TNK1Q13470 666 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 P2RY6Q15077 328 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 RSU1Q15404 277 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 MPPED2Q15777 294 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 NDUFA5Q16718 116 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 TBC1D28Q2M2D7 210 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 MOGAT2Q3SYC2 334 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 SLC22A6Q4U2R8 563 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 KRTCAP3Q53RY4 240 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 NSUN5P2Q63ZY6 315 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 ZNF626Q68DY1 528 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 OR10K2Q6IF99 312 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 LPCAT3Q6P1A2 487 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 MTFR2Q6P444 385 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 TFAP2EQ6VUC0 442 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 GLCCI1Q86VQ1 547 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 TMEM200AQ86VY9 491 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 FAM169BQ8N8A8 192 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 TMEM104Q8NE00 496 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 OR5A2Q8NGI9 324 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 OR51S1Q8NGJ8 323 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 OR51T1Q8NGJ9 327 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 FGFBP3Q8TAT2 258 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 ZFAND1Q8TCF1 268 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 SNAPC3Q92966 411 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 RNF170Q96K19 258 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 Q96M66 194 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 HIST1H2AAQ96QV6 131 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 SOX7Q9BT81 388 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 GON7Q9BXV9 100 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 SELENOIQ9C0D9 397 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 CHST6Q9GZX3 395 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 OR10A4Q9H209 315 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 TP63Q9H3D4 680 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-221ENST00000553498 PLK3Q9H4B4 646 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 SLA2Q9H6Q3 261 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 MRPL15Q9P015 296 aaKnown RBP6.32□□□□□ -1.4
ATXN3-221ENST00000553498 EIF3KQ9UBQ5 218 aaKnown RBP6.32□□□□□ -1.4
ATXN3-221ENST00000553498 GPR179Q6PRD1 2367 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 VPS13AQ96RL7 3174 aa6.32□□□□□ -1.4
ATXN3-221ENST00000553498 SEC16AO15027 2179 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 LOC100509620A0A075B734 347 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 C5orf63A6NC05 138 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 MBD3L4A6NDZ8 208 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-221ENST00000553498 MBD3L3A6NE82 208 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-221ENST00000553498 MBD3L5A6NJ08 208 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-221ENST00000553498 OR5B21A6NL26 309 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 CEACAM18A8MTB9 384 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 MKRN2OSH3BPM6 223 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 KLK10O43240 276 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms