RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 AMY2BP19961 511 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 TGFBR2P37173 567 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 UBE2E1P51965 193 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 DGUOKQ16854 277 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 ZNF684Q5T5D7 378 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 PLCXD3Q63HM9 321 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 MOB3CQ70IA8 216 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 TMEM185AQ8NFB2 350 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 OR5D13Q8NGL4 314 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 OR5R1Q8NH85 324 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 LINC01006Q8NI28 216 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 OR51E1Q8TCB6 317 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 UBE2FQ969M7 185 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 DUS3LQ96G46 650 aaKnown RBP10.47□□□□□ -0.73
LINC00643-202ENST00000553426 CITED1Q99966 193 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 OR51I2Q9H344 312 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 FAM206AQ9NX38 181 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 RASL12Q9NYN1 266 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 ZNRD1Q9P1U0 126 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 VPREB3Q9UKI3 123 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.47□□□□□ -0.73
LINC00643-202ENST00000553426 GTF2A1LQ9UNN4 478 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 PIGLQ9Y2B2 252 aa10.47□□□□□ -0.73
LINC00643-202ENST00000553426 SF3B6Q9Y3B4 125 aaKnown RBP10.47□□□□□ -0.73
LINC00643-202ENST00000553426 hCG_1809904A0A1W2PP81 198 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 A0A1W2PPE2 198 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 A0A1W2PR64 198 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 A0A1W2PRD5 423 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 A0A1W2PRF3 423 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 A0A1W2PRM7 423 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 A0A1W2PRV1 198 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 TCRBV3S1A0A5B6 114 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 ANKRD61A6NGH8 418 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 SLC22A31A6NKX4 558 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 SLC1A7O00341 560 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 RHBDL1O75783 438 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 DHRS3O75911 302 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 DNAJC8O75937 253 aaPredicted RBP10.46□□□□□ -0.73
LINC00643-202ENST00000553426 NRASP01111 189 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 PSG2P11465 335 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 ESRRGP62508 458 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 ROM1Q03395 351 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 SRSF4Q08170 494 aaKnown RBP10.46□□□□□ -0.73
LINC00643-202ENST00000553426 ACSM1Q08AH1 577 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 PTGES3Q15185 160 aaKnown RBP10.46□□□□□ -0.73
LINC00643-202ENST00000553426 OCLNQ16625 522 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 SMIM21Q3B7S5 101 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 HAGHLQ6PII5 290 aaPredicted RBP10.46□□□□□ -0.73
LINC00643-202ENST00000553426 KRT74Q7RTS7 529 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 ZNF573Q86YE8 665 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 FAM185AQ8N0U4 392 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 Q8N7P7 452 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 OR8B4Q96RC9 309 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 MNTQ99583 582 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 FAM234AQ9H0X4 552 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 MMP27Q9H306 513 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 MOB1AQ9H8S9 216 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 TCF7L1Q9HCS4 588 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 NUFIP1Q9UHK0 495 aaKnown RBP10.46□□□□□ -0.73
LINC00643-202ENST00000553426 ENOPH1Q9UHY7 261 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 POMPQ9Y244 141 aa10.46□□□□□ -0.73
LINC00643-202ENST00000553426 IGKV1D-17A0A075B6S4 117 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 LOC110117498-PIK3R3F6TDL0 507 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 CLPXO76031 633 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 FAHP16930 419 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 SAA4P35542 130 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 DEFA6Q01524 100 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 TAF9Q16594 264 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 CLVS2Q5SYC1 327 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 BCL2L15Q5TBC7 163 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 FAHD1Q6P587 224 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 ZNF322Q6U7Q0 402 aaPredicted RBP10.45□□□□□ -0.74
LINC00643-202ENST00000553426 MEPCEQ7L2J0 689 aaKnown RBP10.45□□□□□ -0.74
LINC00643-202ENST00000553426 ZSCAN4Q8NAM6 433 aaPredicted RBP10.45□□□□□ -0.74
LINC00643-202ENST00000553426 ZNRF1Q8ND25 227 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 OR5K1Q8NHB7 308 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 BCAS4Q8TDM0 211 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 AQP3Q92482 292 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 SDSLQ96GA7 329 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 FGF23Q9GZV9 251 aaPredicted RBP10.45□□□□□ -0.74
LINC00643-202ENST00000553426 SEMA6AQ9H2E6 1030 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 KRT84Q9NSB2 600 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 POLDIP2Q9Y2S7 368 aa10.45□□□□□ -0.74
LINC00643-202ENST00000553426 CCDC182A6NF36 153 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 ZNF670-ZNF695F2Z2N8 137 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 DLGAP1O14490 977 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 ANGPTL7O43827 346 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 PRKYO43930 277 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 TFF1P04155 84 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 HAAOP46952 286 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 DAPP51397 102 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 CXCR4P61073 352 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 PRB3Q04118 309 aaPredicted RBP10.44□□□□□ -0.74
LINC00643-202ENST00000553426 KLRD1Q13241 179 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 MIDNQ504T8 468 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 NXNL2Q5VZ03 156 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 ACP7Q6ZNF0 438 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 Q6ZSV7 163 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 SLC35F2Q8IXU6 374 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 ZNF561Q8N587 486 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms