RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 ABCB10Q9NRK6 738 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 TBC1D23Q9NUY8 699 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 USE1Q9NZ43 259 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 DNAH3Q8TD57 4116 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 RYR3Q15413 4870 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 RFPL4AA6NLU0 287 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 ODF3BA8MYP8 253 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 ZNF732B4DXR9 585 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 RFPL4AL1F8VTS6 287 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 NDUFAB1O14561 156 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 SYNGR1O43759 233 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 MTRF1O75570 445 aaKnown RBP7.3□□□□□ -1.24
SYNE2-209ENST00000553308 APOC1P02654 83 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 PF4P02776 101 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 ARG1P05089 322 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 H2BFMP0C1H6 154 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 HOXD3P31249 432 aaPredicted RBP7.3□□□□□ -1.24
SYNE2-209ENST00000553308 SSX2Q16385 188 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 TCTEX1D4Q5JR98 221 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 CEP78Q5JTW2 689 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 HAGHLQ6PII5 290 aaPredicted RBP7.3□□□□□ -1.24
SYNE2-209ENST00000553308 CCDC121Q6ZUS5 278 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 OR5AU1Q8NGC0 362 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 AQP3Q92482 292 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 FOXRED1Q96CU9 486 aaPredicted RBP7.3□□□□□ -1.24
SYNE2-209ENST00000553308 ZNF488Q96MN9 340 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 INTS14Q96SY0 518 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 OCSTAMPQ9BR26 566 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 TSSK6Q9BXA6 273 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 OR51I2Q9H344 312 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 MED20Q9H944 212 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 EFCAB1Q9HAE3 211 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 ARMC1Q9NVT9 282 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 IL20Q9NYY1 176 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 LRP12Q9Y561 859 aa7.3□□□□□ -1.24
SYNE2-209ENST00000553308 COL7A1Q02388 2944 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 A0A1W2PPH5 198 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 MEX3AA1L020 520 aaKnown RBP7.29□□□□□ -1.24
SYNE2-209ENST00000553308 FAM183AA6NL82 134 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 F2RL2O00254 374 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 GMNNO75496 209 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 SOX14O95416 240 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 FABP3P05413 133 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 PIPP12273 146 aaPredicted RBP7.29□□□□□ -1.24
SYNE2-209ENST00000553308 DLX6P56179 175 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 GNG3P63215 75 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 ACP7Q6ZNF0 438 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 RASSF6Q6ZTQ3 369 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 OR8B12Q8NGG6 310 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 OR2T27Q8NH04 317 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 MCUR1Q96AQ8 359 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 RCC1LQ96I51 464 aaKnown RBP7.29□□□□□ -1.24
SYNE2-209ENST00000553308 HIST1H2AAQ96QV6 131 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 B9D2Q9BPU9 175 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 C1orf21Q9H246 121 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 GORASP2Q9H8Y8 452 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 SPAG4Q9NPE6 437 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 INPP5EQ9NRR6 644 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 TAS2R1Q9NYW7 299 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 PITPNC1Q9UKF7 332 aa7.29□□□□□ -1.24
SYNE2-209ENST00000553308 TBL2Q9Y4P3 447 aaKnown RBP7.29□□□□□ -1.24
SYNE2-209ENST00000553308 hCG_1809904A0A1W2PP81 198 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 A0A1W2PPE2 198 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 A0A1W2PR64 198 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 A0A1W2PRV1 198 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 TCRBV4S1A1TA0A5B7 111 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 RIIAD1A6NNX1 92 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 C17orf98A8MV24 154 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 SLC1A7O00341 560 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 GASTP01350 101 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 ALDOBP05062 364 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 GSTT1P30711 240 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 PRDX2P32119 198 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 BLVRAP53004 296 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 PSMA6P60900 246 aaKnown RBP7.28□□□□□ -1.24
SYNE2-209ENST00000553308 EGFEM1PQ0D2K5 195 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 SMIM21Q3B7S5 101 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 CEACAM21Q3KPI0 293 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 ZNF626Q68DY1 528 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 ZNF770Q6IQ21 691 aaPredicted RBP7.28□□□□□ -1.24
SYNE2-209ENST00000553308 C10orf99Q6UWK7 81 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 SHFQ7M4L6 423 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 BATF2Q8N1L9 274 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 ZNF561Q8N587 486 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 POC1AQ8NBT0 407 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 ZNF671Q8TAW3 534 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 FAM81AQ8TBF8 368 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 MYDGFQ969H8 173 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 MALSU1Q96EH3 234 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 IL1RAPQ9NPH3 570 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 RASL12Q9NYN1 266 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 BAIAP2Q9UQB8 552 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 KLHDC2Q9Y2U9 406 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 HILPDAQ9Y5L2 63 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 LYVE1Q9Y5Y7 322 aa7.28□□□□□ -1.24
SYNE2-209ENST00000553308 OR5B21A6NL26 309 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 E9PQ18 207 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 TNFRSF11BO00300 401 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 ARPC2O15144 300 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 SELENOFO60613 162 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms