RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 A0A1B0GUA9 196 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 ZNF705GA8MUZ8 300 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-208ENST00000553278 KRBOX1C9JBD0 128 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 ADAP1O75689 374 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 LIMS3P0CW19 117 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 LIMS4P0CW20 117 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 HOXA9P31269 272 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 CDC34P49427 236 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-208ENST00000553278 BLVRAP53004 296 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 GFERP55789 205 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 OR10A3P58181 314 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 MYL6P60660 151 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 RAP1AP62834 184 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 PPIDQ08752 370 aaKnown RBP3.98□□□□□ -1.77
SCFD1-208ENST00000553278 PSG7Q13046 419 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 DMC1Q14565 340 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 TIMM23BQ5SRD1 257 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 KDM4DQ6B0I6 523 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 Q6ZSR6 202 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 MYPOPQ86VE0 399 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-208ENST00000553278 OR2AE1Q8NHA4 323 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 SNF8Q96H20 258 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 RSG1Q9BU20 258 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 IFI27L2Q9H2X8 130 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 RDH14Q9HBH5 336 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 EXOSC4Q9NPD3 245 aaKnown RBP3.98□□□□□ -1.77
SCFD1-208ENST00000553278 RPS10P5Q9NQ39 176 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 NAGKQ9UJ70 344 aa3.98□□□□□ -1.77
SCFD1-208ENST00000553278 IGKV1-27A0A075B6S5 117 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 TRIM49D1C9J1S8 452 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 C9J4A7 227 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 NDUFC2-KCTD14E9PQ53 114 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 REM1O75628 298 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 IGKV1D-16P01601 117 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 ORM1P02763 201 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 ADRB3P13945 408 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 ZNF17P17021 662 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 PVALBP20472 110 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-208ENST00000553278 TTPAP49638 278 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 LHX2P50458 406 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 DSCR10P59022 87 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 CDK5Q00535 292 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 MED21Q13503 144 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 C16orf72Q14CZ0 275 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 SDHAF4Q5VUM1 108 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 NIPAL1Q6NVV3 410 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 ZNF530Q6P9A1 599 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-208ENST00000553278 USP50Q70EL3 339 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-208ENST00000553278 OR1J4Q8NGS1 313 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 OR13G1Q8NGZ3 307 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 WDR34Q96EX3 536 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 MRPL48Q96GC5 212 aaKnown RBP3.97□□□□□ -1.77
SCFD1-208ENST00000553278 KCNS1Q96KK3 526 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 APOL4Q9BPW4 351 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 PYGO2Q9BRQ0 406 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 LHX5Q9H2C1 402 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 DDX19AQ9NUU7 478 aaKnown RBP3.97□□□□□ -1.77
SCFD1-208ENST00000553278 CBY1Q9Y3M2 126 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 ZNF318Q5VUA4 2279 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 ADAMTSL3P82987 1691 aa3.97□□□□□ -1.77
SCFD1-208ENST00000553278 IGLV3-10A0A075B6K4 115 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 IGHV5-10-1A0A0J9YXX1 117 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 GOLGA8KD6RF30 607 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 GOLGA8MH3BSY2 632 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 MPZL2O60487 215 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 AHSA1O95433 338 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 PCCAP05165 728 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-208ENST00000553278 KRT7P08729 469 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 ZNF35P13682 527 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 PSMB9P28065 219 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 DRD3P35462 400 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 MAGEA2P43356 314 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 STC1P52823 247 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 WNT4P56705 351 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 RAB8AP61006 207 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 CALHM1Q8IU99 346 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 C10orf107Q8IVU9 208 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 CYP4Z2PQ8N1L4 340 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 CCNYL1Q8N7R7 359 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 COQ8AQ8NI60 647 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 ENKURQ8TC29 256 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 FAM45AQ8TCE6 357 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 BLNKQ8WV28 456 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 DNAJB3Q8WWF6 145 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 GHSRQ92847 366 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 PHYHIPLQ96FC7 376 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 MRAP2Q96G30 205 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 OR2A5Q96R48 311 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 OR4K3Q96R72 315 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 PITX2Q99697 317 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 RPP21Q9H633 154 aaKnown RBP3.96□□□□□ -1.78
SCFD1-208ENST00000553278 HMG20AQ9NP66 347 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 USE1Q9NZ43 259 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 PRO0628Q9UI54 55 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 POLR3AO14802 1390 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-208ENST00000553278 ADCY9O60503 1353 aa3.96□□□□□ -1.78
SCFD1-208ENST00000553278 M0R1X1 148 aa3.95□□□□□ -1.78
SCFD1-208ENST00000553278 SERPINB7O75635 380 aa3.95□□□□□ -1.78
SCFD1-208ENST00000553278 MT-ND4P03905 459 aa3.95□□□□□ -1.78
SCFD1-208ENST00000553278 IGHV1-8P0DP01 117 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms