RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 SERPINE3A8MV23 424 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 SNAPC5O75971 98 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 RGS11O94810 467 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 ZBTB25P24278 435 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 FUT6P51993 359 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 RSU1Q15404 277 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 LYG2Q86SG7 212 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 ARHGAP21Q5T5U3 1957 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 ZNF816-ZNF321PA0A0X1KG74 233 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 SPRY1O43609 319 aaPredicted RBP12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 ANGPTL7O43827 346 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 HTR3BO95264 441 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 AMY2BP19961 511 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 NFYAP23511 347 aaPredicted RBP12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 CCL11P51671 97 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 ATP1B3P54709 279 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 PPA1Q15181 289 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 RTL6Q6ICC9 239 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 FAHD2BQ6P2I3 314 aaPredicted RBP12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 C11orf88Q6PI97 169 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 MOB3CQ70IA8 216 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 ARRDC1Q8N5I2 433 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 ZNF680Q8NEM1 530 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 TERB2Q8NHR7 220 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 PIGCQ92535 297 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 FAHD2AQ96GK7 314 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 TECTBQ96PL2 329 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 ST6GALNAC5Q9BVH7 336 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 DPCDQ9BVM2 203 aaPredicted RBP12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 FN3KRPQ9HA64 309 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 KCNN3Q9UGI6 736 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 SLC7A11Q9UPY5 501 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 CSAG2Q9Y5P2 127 aa12.15□□□□□ -0.46
RAB3IP-216ENST00000552199 ZNF503-AS2A6NEH8 195 aa12.14□□□□□ -0.47
RAB3IP-216ENST00000552199 MCRIP1C9JLW8 97 aa12.14□□□□□ -0.47
RAB3IP-216ENST00000552199 MPC2O95563 127 aa12.14□□□□□ -0.47
RAB3IP-216ENST00000552199 IL2RAP01589 272 aa12.14□□□□□ -0.47
RAB3IP-216ENST00000552199 HLA-AP01891 365 aaKnown RBP12.14□□□□□ -0.47
RAB3IP-216ENST00000552199 CSTBP04080 98 aaKnown RBP12.14□□□□□ -0.47
RAB3IP-216ENST00000552199 CD79AP11912 226 aa12.14□□□□□ -0.47
RAB3IP-216ENST00000552199 CXCL2P19875 107 aa12.14□□□□□ -0.47
RAB3IP-216ENST00000552199 GABRR1P24046 479 aa12.14□□□□□ -0.47
RAB3IP-216ENST00000552199 CD34P28906 385 aa12.14□□□□□ -0.47
RAB3IP-216ENST00000552199 ARR3P36575 388 aa12.14□□□□□ -0.47
RAB3IP-216ENST00000552199 PPP1R1AQ13522 171 aa12.14□□□□□ -0.47
RAB3IP-216ENST00000552199 CAMK2BQ13554 666 aa12.14□□□□□ -0.47
RAB3IP-216ENST00000552199 GRK1Q15835 563 aa12.14□□□□□ -0.47
RAB3IP-216ENST00000552199 LY6G6FQ5SQ64 297 aa12.14□□□□□ -0.47
RAB3IP-216ENST00000552199 IGF2-ASQ6U949 168 aa12.14□□□□□ -0.47
RAB3IP-216ENST00000552199 OR5H2Q8NGV7 314 aa12.14□□□□□ -0.47
RAB3IP-216ENST00000552199 C9orf170A2RU37 121 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 C5orf49A4QMS7 147 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 HMSDA8MTL9 139 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 EFSO43281 561 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 PLATP00750 562 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 C4BPBP20851 252 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 SNU13P55769 128 aaKnown RBP12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 RAB1AP62820 205 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 PLCXD3Q63HM9 321 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 C6orf201Q7Z4U5 140 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 ADAD2Q8NCV1 583 aaKnown RBP12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 FDCSPQ8NFU4 85 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 MARCH1Q8TCQ1 289 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 ELMOD3Q96FG2 381 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 REPIN1Q9BWE0 567 aaKnown RBP12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 CLEC4MQ9H2X3 399 aaPredicted RBP12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 PLEKHJ1Q9NW61 149 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 PRSS50Q9UI38 385 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 ZNF230Q9UIE0 474 aaPredicted RBP12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 NOP16Q9Y3C1 178 aaKnown RBP12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 PTPRBP23467 1997 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 SLC22A20A6NK97 555 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 FIGNL2A6NMB9 653 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 CEACAM18A8MTB9 384 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 L7N2F9 121 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 ERVH48-1M5A8F1 160 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 SERPINA5P05154 406 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 WT1P19544 449 aaPredicted RBP12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 CCNOP22674 350 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 AGTR1P30556 359 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 OR3A3P47888 321 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 OR3A2P47893 321 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 TAS2R46P59540 309 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 SEC61A1P61619 476 aaKnown RBP12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 PMP22Q01453 160 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 TCF15Q12870 199 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 PDZK1IP1Q13113 114 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 OPCMLQ14982 345 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 SIGIRRQ6IA17 410 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 CSNK2A3Q8NEV1 391 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 PXT1Q8NFP0 134 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 C12orf49Q9H741 205 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 GP6Q9HCN6 339 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 IL36GQ9NZH8 169 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 ZNF175Q9Y473 711 aa12.13□□□□□ -0.47
RAB3IP-216ENST00000552199 IGKV1-12A0A0C4DH73 117 aa12.12□□□□□ -0.47
RAB3IP-216ENST00000552199 IGKV1D-12P01611 117 aa12.12□□□□□ -0.47
RAB3IP-216ENST00000552199 CCL2P13500 99 aa12.12□□□□□ -0.47
RAB3IP-216ENST00000552199 IL13RA1P78552 427 aa12.12□□□□□ -0.47
RAB3IP-216ENST00000552199 SRSF4Q08170 494 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms