RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 EMX2Q04743 252 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 CHRNB3Q05901 458 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 MFGE8Q08431 387 aaPredicted RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 RBBP4Q09028 425 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF154Q13106 437 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 TMEM187Q14656 261 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ZMYND11Q15326 602 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 FAM189A2Q15884 450 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 CEACAM16Q2WEN9 425 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 VPS26BQ4G0F5 336 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 GLIPR1L2Q4G1C9 344 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 GPAT3Q53EU6 434 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 KLHL22Q53GT1 634 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 MRPL2Q5T653 305 aaKnown RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 C1orf140Q5VVS0 124 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 IL23RQ5VWK5 629 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 TTC19Q6DKK2 380 aaPredicted RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 OR4F3Q6IEY1 312 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ACSM5Q6NUN0 579 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 C16orf87Q6PH81 154 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF730Q6ZMV8 503 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF836Q6ZNA1 936 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 LRRC74BQ6ZQY2 392 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 EIF3MQ7L2H7 374 aaKnown RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 AAED1Q7RTV5 226 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ADCK1Q86TW2 530 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 RNF130Q86XS8 419 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 SLC22A9Q8IVM8 553 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 FUNDC1Q8IVP5 155 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 LRRC34Q8IZ02 419 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 COX18Q8N8Q8 333 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ZSCAN4Q8NAM6 433 aaPredicted RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ATP6V1C2Q8NEY4 427 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 GPR32P1Q8NGA4 272 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 OR9Q2Q8NGE9 314 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 OR10G7Q8NGN6 311 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 OR5AK3PQ8NH89 298 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 LIPHQ8WWY8 451 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 RAB8BQ92930 207 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 HIST1H2ACQ93077 130 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 SLC38A4Q969I6 547 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 SLC35B4Q969S0 331 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ROPN1LQ96C74 230 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 PPCDCQ96CD2 204 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 RAB39BQ96DA2 213 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 FAM218AQ96MZ4 157 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ALKBH3Q96Q83 286 aaPredicted RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF607Q96SK3 696 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 LITAFQ99732 161 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 NAPGQ99747 312 aaPredicted RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 COQ7Q99807 217 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ASCL2Q99929 193 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 PRSS27Q9BQR3 290 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 OR51I1Q9H343 314 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 TPK1Q9H3S4 243 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 IKZF5Q9H5V7 419 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 C16orf95Q9H693 158 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF385DQ9H6B1 395 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 C12orf10Q9HB07 376 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 TMEM165Q9HC07 324 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 CRLF2Q9HC73 371 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 BCL2L10Q9HD36 194 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 MEPEQ9NQ76 525 aaPredicted RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 TIGARQ9NQ88 270 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 FAM212BQ9NTI7 297 aaPredicted RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 NMRK1Q9NWW6 199 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 SLC25A37Q9NYZ2 338 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 EMC3Q9P0I2 261 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 SLC17A7Q9P2U7 560 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 CACNG5Q9UF02 275 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 BTNL2Q9UIR0 455 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 PURGQ9UJV8 347 aaKnown RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 EXOGQ9Y2C4 368 aaKnown RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 SLC35A3Q9Y2D2 325 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 STK38LQ9Y2H1 464 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 KMT2AQ03164 3969 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 IGLV7-46A0A075B6I9 117 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 A0A087WUJ7 227 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 A0A0B4J2E0 115 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 KIR2DS1A0A191URI9 304 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 A0A1B0GWA3 101 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 A0A1B0GX12 115 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 CIB4A0PJX0 185 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 C5orf63A6NC05 138 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 OR6C65A6NJZ3 312 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 CCT8L1PA6NM43 557 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 SRRM5B3KS81 715 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 LRRN3E7EW58 273 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 G3V4G9 280 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.87□□□□□ -2.11
CPSF6-207ENST00000551516 K7EQD1 137 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 SDHDO14521 159 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 ARPC1BO15143 372 aaKnown RBP1.87□□□□□ -2.11
CPSF6-207ENST00000551516 TNFSF12O43508 249 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 PEX11AO75192 247 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 SMIM24O75264 130 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 SNNO75324 88 aaPredicted RBP1.87□□□□□ -2.11
CPSF6-207ENST00000551516 VAMP5O95183 116 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 MPZL1O95297 269 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms