RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 TRAV40A0A0B4J280 105 aa14.3□□□□□ -0.12
CHMP1A-208ENST00000550102 ANKRD61A6NGH8 418 aa14.3□□□□□ -0.12
CHMP1A-208ENST00000550102 J3QT63 122 aa14.3□□□□□ -0.12
CHMP1A-208ENST00000550102 RHBDL1O75783 438 aa14.3□□□□□ -0.12
CHMP1A-208ENST00000550102 VENTXO95231 258 aa14.3□□□□□ -0.12
CHMP1A-208ENST00000550102 KIR3DL2P43630 455 aa14.3□□□□□ -0.12
CHMP1A-208ENST00000550102 HILS1P60008 231 aa14.3□□□□□ -0.12
CHMP1A-208ENST00000550102 FGF12P61328 243 aa14.3□□□□□ -0.12
CHMP1A-208ENST00000550102 ZNF573Q86YE8 665 aa14.3□□□□□ -0.12
CHMP1A-208ENST00000550102 PRSS35Q8N3Z0 413 aa14.3□□□□□ -0.12
CHMP1A-208ENST00000550102 FAM216BQ8N7L0 139 aa14.3□□□□□ -0.12
CHMP1A-208ENST00000550102 PNLDC1Q8NA58 520 aaKnown RBP14.3□□□□□ -0.12
CHMP1A-208ENST00000550102 ZNF671Q8TAW3 534 aa14.3□□□□□ -0.12
CHMP1A-208ENST00000550102 C22orf15Q8WYQ4 148 aa14.3□□□□□ -0.12
CHMP1A-208ENST00000550102 MYCBPQ99417 103 aaPredicted RBP14.3□□□□□ -0.12
CHMP1A-208ENST00000550102 EXOGQ9Y2C4 368 aaKnown RBP14.3□□□□□ -0.12
CHMP1A-208ENST00000550102 PQLC2LA1A4F0 135 aa14.29□□□□□ -0.12
CHMP1A-208ENST00000550102 FADS2O95864 444 aaKnown RBP14.29□□□□□ -0.12
CHMP1A-208ENST00000550102 ECDO95905 644 aaPredicted RBP14.29□□□□□ -0.12
CHMP1A-208ENST00000550102 LIPFP07098 398 aa14.29□□□□□ -0.12
CHMP1A-208ENST00000550102 GLRA1P23415 457 aa14.29□□□□□ -0.12
CHMP1A-208ENST00000550102 ELF3P78545 371 aaPredicted RBP14.29□□□□□ -0.12
CHMP1A-208ENST00000550102 LRRC36Q1X8D7 754 aa14.29□□□□□ -0.12
CHMP1A-208ENST00000550102 OR2G2Q8NGZ5 317 aa14.29□□□□□ -0.12
CHMP1A-208ENST00000550102 ZFAND2BQ8WV99 257 aa14.29□□□□□ -0.12
CHMP1A-208ENST00000550102 RASSF4Q9H2L5 321 aa14.29□□□□□ -0.12
CHMP1A-208ENST00000550102 INPP5EQ9NRR6 644 aa14.29□□□□□ -0.12
CHMP1A-208ENST00000550102 SNTG1Q9NSN8 517 aa14.29□□□□□ -0.12
CHMP1A-208ENST00000550102 NLKQ9UBE8 527 aa14.29□□□□□ -0.12
CHMP1A-208ENST00000550102 ZNF69Q9UC07 566 aa14.29□□□□□ -0.12
CHMP1A-208ENST00000550102 POLDIP2Q9Y2S7 368 aa14.29□□□□□ -0.12
CHMP1A-208ENST00000550102 A0A1B0GW55 424 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 A6NIN4 97 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 OR2AT4A6NND4 320 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 H3BSH0 61 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 NDUFB3O43676 98 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 FCN3O75636 299 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 GATBO75879 557 aaKnown RBP14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 IGHA1P01876 353 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 DUX4L2P0CJ85 424 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 DUX4L3P0CJ86 424 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 DUX4L4P0CJ87 422 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 DUX4L5P0CJ88 424 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 DUX4L6P0CJ89 424 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 DUX4L7P0CJ90 424 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 IGHV4-38-2P0DP08 117 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 PEX2P28328 305 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 HAAOP46952 286 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 OR12D2P58182 307 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 IL13RA1P78552 427 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 RAB40BQ12829 278 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 SMIM21Q3B7S5 101 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 LRRC10Q5BKY1 277 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 ATPAF1Q5TC12 328 aaPredicted RBP14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 FDX2Q6P4F2 183 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 DUX4L9Q6RFH8 374 aaPredicted RBP14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 BTN2A1Q7KYR7 527 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 PACRGLQ8N7B6 248 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 POC1AQ8NBT0 407 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 OR5T2Q8NGG2 359 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 ANGPTL6Q8NI99 470 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 RNF166Q96A37 237 aaPredicted RBP14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 TMIGD2Q96BF3 282 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 C10orf35Q96D05 121 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 C4orf36Q96KX1 117 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 ALG8Q9BVK2 526 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 CHST5Q9GZS9 411 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 DUX4Q9UBX2 424 aa14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 RPUSD1Q9UJJ7 312 aaKnown RBP14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 RPL36Q9Y3U8 105 aaKnown RBP14.28□□□□□ -0.12
CHMP1A-208ENST00000550102 ZNF879B4DU55 563 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 J3QLW9 94 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 GPR37O15354 613 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 PLATP00750 562 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 HTR1AP08908 422 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 ZNF19P17023 458 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 IKZF1Q13422 519 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 GALEQ14376 348 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 TMEM244Q5VVB8 128 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 METTL11BQ5VVY1 283 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 RBMS3Q6XE24 437 aaKnown RBP14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 ZNF788Q6ZQV5 615 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 SYS1Q8N2H4 156 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 TRMT10AQ8TBZ6 339 aaKnown RBP14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 NPRL2Q8WTW4 380 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 APH1BQ8WW43 257 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 CYGBQ8WWM9 190 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 PP6455Q8WZ26 134 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 PELI1Q96FA3 418 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 MED30Q96HR3 178 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 GAFA1Q96PS6 74 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 PCGF1Q9BSM1 259 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 MS4A7Q9GZW8 240 aaPredicted RBP14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 AMBNQ9NP70 447 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 RASL12Q9NYN1 266 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 SLC7A11Q9UPY5 501 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 TENM1Q9UKZ4 2725 aa14.27□□□□□ -0.13
CHMP1A-208ENST00000550102 IGHV3OR16-10A0A075B7F0 116 aa14.26□□□□□ -0.13
CHMP1A-208ENST00000550102 TRIM77I1YAP6 450 aa14.26□□□□□ -0.13
CHMP1A-208ENST00000550102 SIGLEC5O15389 551 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms