RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 ENPP5Q9UJA9 477 aa13.44□□□□□ -0.26
VPS29-207ENST00000549970 OR5B21A6NL26 309 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 ZNF670-ZNF695F2Z2N8 137 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 SIGLEC5O15389 551 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 SRSF10O75494 262 aaKnown RBP13.43□□□□□ -0.26
VPS29-207ENST00000549970 MTRF1O75570 445 aaKnown RBP13.43□□□□□ -0.26
VPS29-207ENST00000549970 DHRS3O75911 302 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 TTRP02766 147 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 EFNB1P98172 346 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 BCL2L15Q5TBC7 163 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 ZBTB37Q5TC79 503 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 HAGHLQ6PII5 290 aaPredicted RBP13.43□□□□□ -0.26
VPS29-207ENST00000549970 GID4Q8IVV7 300 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 KIR3DL3Q8N743 410 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 OR5A2Q8NGI9 324 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 OR51G2Q8NGK0 314 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 ZNF671Q8TAW3 534 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 TBC1D15Q8TC07 691 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 LRTOMTQ8WZ04 291 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 MNTQ99583 582 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 TBX5Q99593 518 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 CIB1Q99828 191 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 SEMA6AQ9H2E6 1030 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 MOB1AQ9H8S9 216 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 POMT1Q9Y6A1 747 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 R4GMQ9 66 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 MGAM2Q2M2H8 2515 aa13.43□□□□□ -0.26
VPS29-207ENST00000549970 IGKV1D-17A0A075B6S4 117 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 A0A1W2PQ09 198 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 A0A1W2PRD5 423 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 A0A1W2PRF3 423 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 A0A1W2PRM7 423 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 ATP5HO75947 161 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 NRASP01111 189 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 IGHV4-59P01825 116 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 ACAA1P09110 424 aaPredicted RBP13.42□□□□□ -0.26
VPS29-207ENST00000549970 PSG2P11465 335 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 FCGR1AP12314 374 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 RAG2P55895 527 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 ACTR3P61158 418 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 RELBQ01201 579 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 KLRD1Q13241 179 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 PRR31Q5SQ13 230 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 ZNF684Q5T5D7 378 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 Q8N7P7 452 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 ZNRF1Q8ND25 227 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 TMEM185AQ8NFB2 350 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 C8orf46Q8TAG6 207 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 AQP3Q92482 292 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 ITFG2Q969R8 447 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 DMRTB1Q96MA1 342 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 ELL3Q9HB65 397 aaPredicted RBP13.42□□□□□ -0.26
VPS29-207ENST00000549970 GPR173Q9NS66 373 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 CLN6Q9NWW5 311 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 C1RLQ9NZP8 487 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 ENOPH1Q9UHY7 261 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 MRM2Q9UI43 246 aaKnown RBP13.42□□□□□ -0.26
VPS29-207ENST00000549970 OR52A1Q9UKL2 312 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 FAM96BQ9Y3D0 163 aa13.42□□□□□ -0.26
VPS29-207ENST00000549970 A6NIN4 97 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 RNASEK-C17orf49H0YIS7 233 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 RPP14O95059 124 aaKnown RBP13.41□□□□□ -0.26
VPS29-207ENST00000549970 KNG1P01042 644 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 EEF1B2P24534 225 aaKnown RBP13.41□□□□□ -0.26
VPS29-207ENST00000549970 POLR2IP36954 125 aaKnown RBP13.41□□□□□ -0.26
VPS29-207ENST00000549970 CAV3P56539 151 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 EGR3Q06889 387 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 METAP1DQ6UB28 335 aaPredicted RBP13.41□□□□□ -0.26
VPS29-207ENST00000549970 SSX6Q7RTT6 188 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 LDLRAD3Q86YD5 345 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 ELMOD2Q8IZ81 293 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 OR4F5Q8NH21 305 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 DUS3LQ96G46 650 aaKnown RBP13.41□□□□□ -0.26
VPS29-207ENST00000549970 ZNF488Q96MN9 340 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 SLITRK2Q9H156 845 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 RIBC2Q9H4K1 309 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 ZNF696Q9H7X3 374 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 BEX1Q9HBH7 125 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 ZNF222Q9UK12 451 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 MAB21L2Q9Y586 359 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 MMP24Q9Y5R2 645 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 SNX5Q9Y5X3 404 aa13.41□□□□□ -0.26
VPS29-207ENST00000549970 APOL3O95236 402 aa13.4□□□□□ -0.26
VPS29-207ENST00000549970 IER3P46695 156 aa13.4□□□□□ -0.26
VPS29-207ENST00000549970 HAAOP46952 286 aa13.4□□□□□ -0.26
VPS29-207ENST00000549970 CAPZA1P52907 286 aa13.4□□□□□ -0.26
VPS29-207ENST00000549970 GUCA2AQ02747 115 aa13.4□□□□□ -0.26
VPS29-207ENST00000549970 ODF4Q2M2E3 257 aa13.4□□□□□ -0.26
VPS29-207ENST00000549970 CLVS2Q5SYC1 327 aa13.4□□□□□ -0.26
VPS29-207ENST00000549970 ACP7Q6ZNF0 438 aa13.4□□□□□ -0.26
VPS29-207ENST00000549970 YIPF7Q8N8F6 280 aa13.4□□□□□ -0.26
VPS29-207ENST00000549970 OR14K1Q8NGZ2 314 aa13.4□□□□□ -0.26
VPS29-207ENST00000549970 DYRK2Q92630 601 aa13.4□□□□□ -0.26
VPS29-207ENST00000549970 WARS2Q9UGM6 360 aaKnown RBP13.4□□□□□ -0.26
VPS29-207ENST00000549970 OAZ3Q9UMX2 235 aa13.4□□□□□ -0.26
VPS29-207ENST00000549970 SLC22A13Q9Y226 551 aa13.4□□□□□ -0.26
VPS29-207ENST00000549970 V9GYS6 101 aa13.4□□□□□ -0.26
VPS29-207ENST00000549970 A0A1B0GTI1 187 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 A0A1B0GUS0 222 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 SAC3D1A6NKF1 404 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms