RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 OPN3Q9H1Y3 402 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-215ENST00000547672 MMP28Q9H239 520 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 PLK3Q9H4B4 646 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 NOX3Q9HBY0 568 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 MCUBQ9NWR8 336 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 NKIRAS2Q9NYR9 191 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 SCP2D1Q9UJQ7 156 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-215ENST00000547672 ZNF503-AS2A6NEH8 195 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 ZNF736B4DX44 427 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-215ENST00000547672 DISC1C4P0D8 188 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 HTR3BO95264 441 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 IGLV1-44P01699 117 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 CCL2P13500 99 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 HIST1H1DP16402 221 aaKnown RBP11.59□□□□□ -0.55
PTCH1-215ENST00000547672 PMELP40967 661 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 ZP1P60852 638 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 GNG3P63215 75 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 PLA2G7Q13093 441 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 C11orf91Q3C1V1 193 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 ZNF718Q3SXZ3 478 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 STEAP1BQ6NZ63 245 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 ZNF782Q6ZMW2 699 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-215ENST00000547672 CELF2-AS1Q8N7Q2 184 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 SPERTQ8NA61 448 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 Q8NA96 180 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 OR51F2Q8NH61 342 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 SNRNP40Q96DI7 357 aaKnown RBP11.59□□□□□ -0.55
PTCH1-215ENST00000547672 MED30Q96HR3 178 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 C1orf147Q96MC9 270 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-215ENST00000547672 SLC25A21Q9BQT8 299 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-215ENST00000547672 RTL8AQ9BWD3 113 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 GPN1Q9HCN4 374 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-215ENST00000547672 LUZP4Q9P127 313 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 MYEF2Q9P2K5 600 aaKnown RBP11.59□□□□□ -0.55
PTCH1-215ENST00000547672 HSF4Q9ULV5 492 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 DCHS1Q96JQ0 3298 aa11.59□□□□□ -0.55
PTCH1-215ENST00000547672 PQLC2LA1A4F0 135 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 TOXO94900 526 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 RAB3DO95716 219 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 NGFP01138 241 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 MT-ND4P03905 459 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 IFNA6P05013 189 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 FAM87AP0C7U9 286 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 SERPINA2P20848 420 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 BLVRBP30043 206 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-215ENST00000547672 GCH1P30793 250 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 WNT5AP41221 380 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 ARFRP1Q13795 201 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 RBMS2Q15434 407 aaKnown RBP11.58□□□□□ -0.56
PTCH1-215ENST00000547672 TATDN3Q17R31 274 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 C3P1Q6ZMU1 363 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 TRAPPC6BQ86SZ2 158 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 LINC00596Q86U02 117 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 OSR2Q8N2R0 312 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 OR1J1Q8NGS3 322 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 OR5P3Q8WZ94 311 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 MS4A3Q96HJ5 214 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 RNF170Q96K19 258 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 PRRT1Q99946 306 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 OCSTAMPQ9BR26 566 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 BANF2Q9H503 90 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 EDARQ9UNE0 448 aa11.58□□□□□ -0.56
PTCH1-215ENST00000547672 SPTBN4Q9H254 2564 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 A8MXE2 369 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 TRAPPC2LH3BP13 241 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 SSX4O60224 188 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 SMPD2O60906 423 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 PEX14O75381 377 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 CCNKO75909 580 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 ZNF35P13682 527 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 HLXQ14774 488 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-215ENST00000547672 LINC00303Q3SY05 128 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 RNASE10Q5GAN6 216 aaKnown RBP11.57□□□□□ -0.56
PTCH1-215ENST00000547672 METTL11BQ5VVY1 283 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 ELP2Q6IA86 826 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 MTFR2Q6P444 385 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 FJX1Q86VR8 437 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 TMEM17Q86X19 198 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 Q8IYB0 196 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 TMEM104Q8NE00 496 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 Q8NFD4 153 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 OR5D18Q8NGL1 313 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 OR8S1Q8NH09 359 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 CCDC107Q8WV48 283 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 RND1Q92730 232 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 HPS1Q92902 700 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 CMBLQ96DG6 245 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 SCGB3A2Q96PL1 93 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 VKORC1Q9BQB6 163 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 PKIBQ9C010 78 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 CHST6Q9GZX3 395 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 KCNK15Q9H427 330 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 NUDT15Q9NV35 164 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 PLEKHJ1Q9NW61 149 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 SLC25A15Q9Y619 301 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 CACNA1GO43497 2377 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 ACACAQ13085 2346 aa11.57□□□□□ -0.56
PTCH1-215ENST00000547672 TMEM235A6NFC5 223 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 TMEM210A6NLX4 147 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms